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  5. Ceric.14G029700.1

Ceric.14G029700.1 (SDE1, RDR6, SGS2,...)


Aliases : SDE1, RDR6, SGS2, Ceric.14G029700

Description : ssRNA polymerase *(RDR6) & original description: pacid=50633406 polypeptide=Ceric.14G029700.1.p locus=Ceric.14G029700 ID=Ceric.14G029700.1.v2.1 annot-version=v2.1


Gene families : OG0001039 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001039_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.14G029700.1

Target Alias Description ECC score Gene Family Method Actions
Ala_g04271 ATRDRP1, RDR1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene17564.t1 SDE1, RDR6,... ssRNA polymerase *(RDR6) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g14760 SDE1, RDR6, SGS2 ssRNA polymerase *(RDR6) & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g04117 SDE1, RDR6, SGS2 ssRNA polymerase *(RDR6) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g07935 SDE1, RDR6, SGS2 ssRNA polymerase *(RDR6) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g15315 SDE1, RDR6, SGS2 ssRNA polymerase *(RDR6) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g01470 SDE1, RDR6, SGS2 ssRNA polymerase *(RDR6) & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g25333 No alias ssRNA polymerase *(RDR6) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g114140.3.1 SMD1, RDR2,... ssRNA polymerase (RDR2) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003968 RNA-dependent RNA polymerase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006813 potassium ion transport IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0071805 potassium ion transmembrane transport IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR007855 RNA-dep_RNA_pol_euk-typ 410 988
No external refs found!