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  5. Ceric.14G023800.1

Ceric.14G023800.1 (MBD11, ATMBD11,...)


Aliases : MBD11, ATMBD11, Ceric.14G023800

Description : methylation reader *(MBD10-11) & original description: pacid=50634645 polypeptide=Ceric.14G023800.1.p locus=Ceric.14G023800 ID=Ceric.14G023800.1.v2.1 annot-version=v2.1


Gene families : OG0000919 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000919_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.14G023800.1
Cluster HCCA: Cluster_121

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00169140 MBD11, ATMBD11,... Methyl-CpG-binding domain-containing protein 11... 0.03 OrthoFinder output from all 47 species
Adi_g058503 No alias methylation reader *(MBD10-11) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g05333 MBD11, ATMBD11 methylation reader *(MBD10-11) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g05443 MBD10 methylation reader *(MBD10-11) & original description: none 0.03 OrthoFinder output from all 47 species
MA_72639g0010 MBD10 methylation reader (MBD10-11) 0.05 OrthoFinder output from all 47 species
Nbi_g15405 No alias methylation reader *(MBD10-11) & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g32626 MBD11, ATMBD11 methylation reader *(MBD10-11) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g19997 MBD10 methylation reader *(MBD10-11) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g12685 MBD11, ATMBD11 methylation reader *(MBD10-11) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e004995_P005 MBD11, ATMBD11,... methylation reader (MBD10-11) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000702 oxidized base lesion DNA N-glycosylase activity IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003684 damaged DNA binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006284 base-excision repair IEP HCCA
BP GO:0006289 nucleotide-excision repair IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
MF GO:0008534 oxidized purine nucleobase lesion DNA N-glycosylase activity IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
MF GO:0019104 DNA N-glycosylase activity IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001739 Methyl_CpG_DNA-bd 13 82
No external refs found!