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  5. Ceric.14G017300.1

Ceric.14G017300.1 (Ceric.14G017300)


Aliases : Ceric.14G017300

Description : pectin methylesterase & original description: pacid=50633802 polypeptide=Ceric.14G017300.1.p locus=Ceric.14G017300 ID=Ceric.14G017300.1.v2.1 annot-version=v2.1


Gene families : OG0000083 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000083_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.14G017300.1
Cluster HCCA: Cluster_211

Target Alias Description ECC score Gene Family Method Actions
AT2G36710 No alias Pectin lyase-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G07430 No alias Pectin lyase-like superfamily protein 0.01 OrthoFinder output from all 47 species
AT5G19730 No alias Pectin lyase-like superfamily protein 0.01 OrthoFinder output from all 47 species
AT5G26810 No alias Pectin lyase-like superfamily protein 0.03 OrthoFinder output from all 47 species
Aev_g39532 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g16581 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07065 No alias pectin methylesterase & original description: none 0.01 OrthoFinder output from all 47 species
Als_g12395 No alias pectin methylesterase & original description: none 0.01 OrthoFinder output from all 47 species
Aob_g06410 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g16629 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g67425 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene16842.t2 Aspi01Gene16842 pectin methylesterase & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene20189.t1 Aspi01Gene20189 pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34270.t1 Aspi01Gene34270 pectin methylesterase & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene49142.t1 Aspi01Gene49142 pectin methylesterase & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g03729 No alias pectin methylesterase & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g05738 No alias pectin methylesterase & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g11546 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.13G038200.1 Ceric.13G038200 pectin methylesterase & original description:... 0.01 OrthoFinder output from all 47 species
Ceric.19G035800.1 Ceric.19G035800 pectin methylesterase & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.19G035900.1 Ceric.19G035900 pectin methylesterase & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.1Z171200.1 Ceric.1Z171200 pectin methylesterase & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.1Z228300.1 Ceric.1Z228300 pectin methylesterase & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.21G056100.1 VGDH1, Ceric.21G056100 not classified & original description: pacid=50603924... 0.02 OrthoFinder output from all 47 species
Ceric.35G046900.1 Ceric.35G046900 pectin methylesterase & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.37G019000.1 Ceric.37G019000 pectin methylesterase & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.37G019300.1 Ceric.37G019300 pectin methylesterase & original description:... 0.01 OrthoFinder output from all 47 species
Ceric.37G019400.1 Ceric.37G019400 pectin methylesterase & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.39G035900.1 Ceric.39G035900 pectin methylesterase & original description:... 0.01 OrthoFinder output from all 47 species
Dac_g05020 No alias pectin methylesterase & original description: none 0.01 OrthoFinder output from all 47 species
Dac_g17627 No alias pectin methylesterase & original description: none 0.01 OrthoFinder output from all 47 species
Dac_g23541 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g51672 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g13696 No alias pectin methylesterase & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g46321 No alias pectin methylesterase & original description: none 0.01 OrthoFinder output from all 47 species
Ehy_g03562 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g12472 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g13030 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ehy_g14386 No alias pectin methylesterase & original description: none 0.01 OrthoFinder output from all 47 species
Ehy_g18839 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g19236 No alias pectin methylesterase & original description: none 0.01 OrthoFinder output from all 47 species
Len_g08372 No alias pectin methylesterase & original description: none 0.05 OrthoFinder output from all 47 species
Len_g53837 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Len_g56779 No alias pectin methylesterase & original description: none 0.01 OrthoFinder output from all 47 species
Lfl_g19805 No alias pectin methylesterase & original description: none 0.01 OrthoFinder output from all 47 species
MA_16389g0020 No alias pectin methylesterase 0.01 OrthoFinder output from all 47 species
MA_19196g0010 ATPE11, PE11 pectin methylesterase 0.01 OrthoFinder output from all 47 species
MA_62865g0010 No alias pectin methylesterase 0.05 OrthoFinder output from all 47 species
MA_7274893g0010 No alias Putative pectinesterase 11 OS=Arabidopsis thaliana... 0.25 OrthoFinder output from all 47 species
Msp_g40955 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g39490 No alias pectin methylesterase & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g42824 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g01612 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g21379 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g28944 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g11138 No alias pectin methylesterase & original description: none 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0031.g010557 No alias pectin methylesterase & original description: CDS=267-1394 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0031.g010560 No alias pectin methylesterase & original description: CDS=797-2077 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0059.g015086 No alias pectin methylesterase & original description: CDS=460-1611 0.01 OrthoFinder output from all 47 species
Sam_g05107 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g079180.4.1 Solyc01g079180 pectin methylesterase 0.03 OrthoFinder output from all 47 species
Solyc12g008530.2.1 Solyc12g008530 pectin methylesterase 0.04 OrthoFinder output from all 47 species
Solyc12g098340.2.1 Solyc12g098340 pectin methylesterase 0.02 OrthoFinder output from all 47 species
Spa_g29457 No alias pectin methylesterase & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g49901 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g49902 No alias pectin methylesterase & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g54581 No alias pectin methylesterase & original description: none 0.01 OrthoFinder output from all 47 species
Zm00001e033546_P001 Zm00001e033546 pectin methylesterase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0030599 pectinesterase activity IEA Interproscan
BP GO:0042545 cell wall modification IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR000070 Pectinesterase_cat 170 327
IPR000070 Pectinesterase_cat 10 104
No external refs found!