Solyc07g016180.3.1 (Solyc07g016180.3)


Aliases : Solyc07g016180.3

Description : 27.3.4 RNA.regulation of transcription.ARF, Auxin Response Factor family Encodes an auxin response factor that


Gene families : OG_01_0000037 (Gene family) Phylogenetic Tree(s): OG0000037_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc07g016180.3.1
Cluster HCCA cluster: Cluster_42

Target Alias Description ECC score Gene Family Method Actions
AT1G19220 ARF19, IAA22, ARF11 auxin response factor 19 0.03 Gene family
GSVIVT01011008001 No alias 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.04 Gene family
GSVIVT01025691001 No alias 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.04 Gene family
LOC_Os04g43910 Os04g0519700 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.03 Gene family
LOC_Os04g56850 Os04g0664400 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.03 Gene family
LOC_Os05g48870 Os05g0563400 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.02 Gene family
LOC_Os06g46410 Os06g0677800 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.04 Gene family
Solyc02g037530.3.1 Solyc02g037530.3 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.05 Gene family
Solyc11g069500.2.1 Solyc11g069500.2 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.04 Gene family
Zm00001d001945 GRMZM2G034840 No description available 0.02 Gene family
Zm00001d011953 GRMZM2G116557 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.03 Gene family
Zm00001d014690 GRMZM2G317900 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.03 Gene family
Zm00001d015243 GRMZM2G102845 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.06 Gene family
Zm00001d031064 GRMZM2G081158 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.03 Gene family
Zm00001d039006 GRMZM2G030710 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.05 Gene family
Zm00001d041497 GRMZM2G073750 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.02 Gene family
Zm00001d043431 GRMZM2G056120 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.06 Gene family

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan
CC GO:0005634 nucleus IEA InterProScan
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
BP GO:0009725 response to hormone IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003340 B3_DNA-bd 135 236
IPR033389 AUX/IAA_dom 1001 1086
IPR010525 Auxin_resp 261 344
No external refs found!