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  5. Ceric.14G007400.1

Ceric.14G007400.1 (FCA, Ceric.14G007400)


Aliases : FCA, Ceric.14G007400

Description : transcription factor *(FCA/SSF) & original description: pacid=50634723 polypeptide=Ceric.14G007400.1.p locus=Ceric.14G007400 ID=Ceric.14G007400.1.v2.1 annot-version=v2.1


Gene families : OG0001208 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001208_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.14G007400.1
Cluster HCCA: Cluster_121

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00046p00168380 FCA,... Flowering time control protein FCA OS=Arabidopsis thaliana 0.08 OrthoFinder output from all 47 species
Adi_g021978 FCA transcription factor *(FCA/SSF) & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g023113 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g41833 FCA transcription factor *(FCA/SSF) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g12891 RBP-DR1, AtRBP-DR1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g24337 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g01730 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0001.g000420 FCA transcription factor *(FCA/SSF) & original description:... 0.03 OrthoFinder output from all 47 species
Azfi_s0133.g049305 No alias not classified & original description: CDS=337-1695 0.04 OrthoFinder output from all 47 species
Azfi_s0314.g064239 FCA transcription factor *(FCA/SSF) & original description:... 0.04 OrthoFinder output from all 47 species
Dde_g31360 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g07627 RBP-DR1, AtRBP-DR1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g09993 FCA transcription factor *(FCA/SSF) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g13021 FCA transcription factor *(FCA/SSF) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g19292 FCA transcription factor *(FCA/SSF) & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01034966001 FCA Flowering time control protein FCA OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_00863 FCA no description available(sp|b8bcz8|fca_orysi : 290.0) 0.04 OrthoFinder output from all 47 species
Gb_05124 FCA no description available(sp|b8bcz8|fca_orysi : 224.0) 0.07 OrthoFinder output from all 47 species
Gb_06455 RBP-DR1, AtRBP-DR1 RNA-binding protein BRN1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Gb_12352 FCA Flowering time control protein FCA OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os09g03610.1 FCA, LOC_Os09g03610 no description available(sp|q6k271|fca_orysj : 775.0) 0.04 OrthoFinder output from all 47 species
Len_g09308 RBP-DR1, AtRBP-DR1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06188 FCA transcription factor *(FCA/SSF) & original description: none 0.09 OrthoFinder output from all 47 species
MA_114047g0010 FCA Flowering time control protein FCA OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
MA_5779g0010 FCA Flowering time control protein FCA OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Ore_g08750 RBP-DR1, AtRBP-DR1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g19709 FCA transcription factor *(FCA/SSF) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12927 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pnu_g13897 FCA transcription factor *(FCA/SSF) & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g31456 FCA transcription factor *(FCA/SSF) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0101.g019799 FCA transcription factor *(FCA/SSF) & original description:... 0.04 OrthoFinder output from all 47 species
Solyc01g058450.3.1 FCA, Solyc01g058450 Flowering time control protein FCA OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Spa_g26694 FCA transcription factor *(FCA/SSF) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g20389 RBP-DR1, AtRBP-DR1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e009433_P002 FCA, Zm00001e009433 no description available(sp|b8bcz8|fca_orysi : 625.0) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005643 nuclear pore IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
MF GO:0017056 structural constituent of nuclear pore IEP HCCA
BP GO:0031047 RNA-mediated gene silencing IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 107 169
IPR000504 RRM_dom 16 83
IPR001202 WW_dom 517 543
No external refs found!