1. Home
  2. Species
  3. Ceratopteris richardii
  4. Sequence
  5. Ceric.13G097100.1

Ceric.13G097100.1 (PAB2, PABP2, ATPAB2,...)


Aliases : PAB2, PABP2, ATPAB2, Ceric.13G097100

Description : not classified & original description: pacid=50635582 polypeptide=Ceric.13G097100.1.p locus=Ceric.13G097100 ID=Ceric.13G097100.1.v2.1 annot-version=v2.1


Gene families : OG0000326 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000326_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.13G097100.1
Cluster HCCA: Cluster_95

Target Alias Description ECC score Gene Family Method Actions
Ceric.09G075800.1 PAB2, PABP2,... mRNA poly-A-tail binding factor *(PABP) & original... 0.02 OrthoFinder output from all 47 species
Pnu_g23299 PAB2, PABP2, ATPAB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006487 protein N-linked glycosylation IEP HCCA
MF GO:0008375 acetylglucosaminyltransferase activity IEP HCCA
BP GO:0009966 regulation of signal transduction IEP HCCA
BP GO:0009967 positive regulation of signal transduction IEP HCCA
BP GO:0010646 regulation of cell communication IEP HCCA
BP GO:0010647 positive regulation of cell communication IEP HCCA
BP GO:0023051 regulation of signaling IEP HCCA
BP GO:0023056 positive regulation of signaling IEP HCCA
MF GO:0030144 alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase activity IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0048518 positive regulation of biological process IEP HCCA
BP GO:0048522 positive regulation of cellular process IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0048584 positive regulation of response to stimulus IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0080134 regulation of response to stress IEP HCCA
BP GO:0080135 regulation of cellular response to stress IEP HCCA
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP HCCA
BP GO:2000638 regulation of SREBP signaling pathway IEP HCCA
BP GO:2000640 positive regulation of SREBP signaling pathway IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 29 99
No external refs found!