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  5. Ceric.13G083500.1

Ceric.13G083500.1 (Ceric.13G083500)


Aliases : Ceric.13G083500

Description : Rab GTPase-activating protein & original description: pacid=50636702 polypeptide=Ceric.13G083500.1.p locus=Ceric.13G083500 ID=Ceric.13G083500.1.v2.1 annot-version=v2.1


Gene families : OG0001800 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001800_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.13G083500.1

Target Alias Description ECC score Gene Family Method Actions
AT5G41940 No alias Ypt/Rab-GAP domain of gyp1p superfamily protein 0.03 OrthoFinder output from all 47 species
Cba_g39040 No alias Rab GTPase-activating protein & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g35557 No alias Rab GTPase-activating protein & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g12215 No alias Rab GTPase-activating protein & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g03391 No alias Rab GTPase-activaTing protein & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000439 transcription factor TFIIH core complex IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006289 nucleotide-excision repair IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006606 protein import into nucleus IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
BP GO:0015074 DNA integration IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034504 protein localization to nucleus IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
MF GO:0043015 gamma-tubulin binding IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051170 import into nucleus IEP HCCA
MF GO:0061608 nuclear import signal receptor activity IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140142 nucleocytoplasmic carrier activity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000195 Rab-GTPase-TBC_dom 303 426
No external refs found!