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  5. Ceric.13G072400.1

Ceric.13G072400.1 (Ceric.13G072400)


Aliases : Ceric.13G072400

Description : homologous recombination repair factor *(MDC1) & original description: pacid=50635854 polypeptide=Ceric.13G072400.1.p locus=Ceric.13G072400 ID=Ceric.13G072400.1.v2.1 annot-version=v2.1


Gene families : OG0002706 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002706_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.13G072400.1

Target Alias Description ECC score Gene Family Method Actions
Ala_g14624 No alias homologous recombination repair factor *(MDC1) &... 0.03 OrthoFinder output from all 47 species
Aob_g14464 No alias homologous recombination repair factor *(MDC1) &... 0.05 OrthoFinder output from all 47 species
Aob_g31847 No alias homologous recombination repair factor *(MDC1) &... 0.05 OrthoFinder output from all 47 species
Aspi01Gene66272.t1 Aspi01Gene66272 homologous recombination repair factor *(MDC1) &... 0.03 OrthoFinder output from all 47 species
Ceric.29G085700.1 Ceric.29G085700 homologous recombination repair factor *(MDC1) &... 0.04 OrthoFinder output from all 47 species
Dac_g11194 No alias homologous recombination repair factor *(MDC1) &... 0.04 OrthoFinder output from all 47 species
Dac_g12895 No alias homologous recombination repair factor *(MDC1) &... 0.03 OrthoFinder output from all 47 species
Dde_g19978 No alias homologous recombination repair factor *(MDC1) &... 0.03 OrthoFinder output from all 47 species
Gb_31633 No alias MDC1-like homologous recombination repair factor 0.02 OrthoFinder output from all 47 species
LOC_Os05g05440.1 LOC_Os05g05440 MDC1-like homologous recombination repair factor 0.03 OrthoFinder output from all 47 species
Lfl_g13951 No alias homologous recombination repair factor *(MDC1) &... 0.02 OrthoFinder output from all 47 species
Mp1g29270.1 No alias MDC1-like homologous recombination repair factor 0.02 OrthoFinder output from all 47 species
Pir_g51852 No alias homologous recombination repair factor *(MDC1) &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003678 DNA helicase activity IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006302 double-strand break repair IEP HCCA
BP GO:0006303 double-strand break repair via nonhomologous end joining IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0036297 interstrand cross-link repair IEP HCCA
CC GO:0043240 Fanconi anaemia nuclear complex IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!