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  5. Ceric.13G059700.1

Ceric.13G059700.1 (Ceric.13G059700)


Aliases : Ceric.13G059700

Description : not classified & original description: pacid=50635257 polypeptide=Ceric.13G059700.1.p locus=Ceric.13G059700 ID=Ceric.13G059700.1.v2.1 annot-version=v2.1


Gene families : OG0001264 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001264_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.13G059700.1
Cluster HCCA: Cluster_147

Target Alias Description ECC score Gene Family Method Actions
Cba_g38524 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g08739 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g13218 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003724 RNA helicase activity IEP HCCA
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
MF GO:0008186 ATP-dependent activity, acting on RNA IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009073 aromatic amino acid family biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 409 436
IPR002885 Pentatricopeptide_repeat 447 471
IPR002885 Pentatricopeptide_repeat 315 340
IPR033443 PPR_long 188 307
No external refs found!