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  5. Ceric.13G024900.1

Ceric.13G024900.1 (Ceric.13G024900)


Aliases : Ceric.13G024900

Description : not classified & original description: pacid=50636356 polypeptide=Ceric.13G024900.1.p locus=Ceric.13G024900 ID=Ceric.13G024900.1.v2.1 annot-version=v2.1


Gene families : OG0000309 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000309_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.13G024900.1
Cluster HCCA: Cluster_46

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00109p00134110 evm_27.TU.AmTr_v1... Protein JINGUBANG OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT1G24130 No alias Transducin/WD40 repeat-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G50120 No alias Transducin/WD40 repeat-like superfamily protein 0.02 OrthoFinder output from all 47 species
Als_g36145 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g62132 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene05740.t1 Aspi01Gene05740 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene05743.t1 Aspi01Gene05743 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene05748.t1 Aspi01Gene05748 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene23387.t1 Aspi01Gene23387 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene23389.t2 Aspi01Gene23389 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene30194.t1 Aspi01Gene30194 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene30197.t1 Aspi01Gene30197 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene44877.t1 Aspi01Gene44877 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene45295.t1 Aspi01Gene45295 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene45302.t1 Aspi01Gene45302 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene72933.t1 Aspi01Gene72933 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.13G024800.1 Ceric.13G024800 not classified & original description: pacid=50636465... 0.07 OrthoFinder output from all 47 species
Dac_g35395 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01031882001 No alias Protein JINGUBANG OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_26403 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_49329g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_634003g0010 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
MA_9030464g0010 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.08 OrthoFinder output from all 47 species
Msp_g34011 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g32500 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g25659 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0223.g026269 No alias not classified & original description: CDS=1-1944 0.03 OrthoFinder output from all 47 species
Smo66275 No alias Protein JINGUBANG OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Solyc03g111780.1.1 Solyc03g111780 Protein JINGUBANG OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Tin_g13772 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e007790_P001 Zm00001e007790 Protein JINGUBANG OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 184 220
IPR001680 WD40_repeat 149 179
IPR001680 WD40_repeat 330 375
IPR001680 WD40_repeat 282 320
No external refs found!