Ceric.12G091100.1 (GAMMA-H2AX, H2AXB,...)


Aliases : GAMMA-H2AX, H2AXB, HTA3, G-H2AX, Ceric.12G091100

Description : histone *(H2A) & original description: pacid=50602159 polypeptide=Ceric.12G091100.1.p locus=Ceric.12G091100 ID=Ceric.12G091100.1.v2.1 annot-version=v2.1


Gene families : OG0000117 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000117_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.12G091100.1

Target Alias Description ECC score Gene Family Method Actions
Zm00001e010515_P001 HTA2, Zm00001e010515 histone (H2A) 0.03 OrthoFinder output from all 47 species
Zm00001e035183_P002 RAT5, HTA1,... histone (H2A) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0006396 RNA processing IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
CC GO:0035145 exon-exon junction complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 12 89
IPR032454 Histone_H2A_C 92 125
No external refs found!