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  5. Ceric.12G038700.1

Ceric.12G038700.1 (RST1, Ceric.12G038700)


Aliases : RST1, Ceric.12G038700

Description : regulatory cofactor *(RST1) of exosome complex & original description: pacid=50601000 polypeptide=Ceric.12G038700.1.p locus=Ceric.12G038700 ID=Ceric.12G038700.1.v2.1 annot-version=v2.1


Gene families : OG0004554 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004554_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.12G038700.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00082p00059940 RST1,... Protein RST1 OS=Arabidopsis thaliana 0.07 OrthoFinder output from all 47 species
AT3G27670 RST1 ARM repeat superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g055838 RST1 regulatory cofactor *(RST1) of exosome complex &... 0.04 OrthoFinder output from all 47 species
Azfi_s0006.g010500 RST1 regulatory cofactor *(RST1) of exosome complex &... 0.03 OrthoFinder output from all 47 species
Cre01.g010650 No alias No description available 0.03 OrthoFinder output from all 47 species
Dde_g22672 RST1 regulatory cofactor *(RST1) of exosome complex &... 0.03 OrthoFinder output from all 47 species
Gb_07737 RST1 regulatory cofactor (RST1) of exosome complex 0.04 OrthoFinder output from all 47 species
LOC_Os01g07490.1 RST1, LOC_Os01g07490 regulatory cofactor (RST1) of exosome complex 0.04 OrthoFinder output from all 47 species
Lfl_g09718 RST1 regulatory cofactor *(RST1) of exosome complex &... 0.03 OrthoFinder output from all 47 species
MA_43690g0010 RST1 Protein RST1 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Mp1g20850.1 RST1 regulatory cofactor (RST1) of exosome complex 0.02 OrthoFinder output from all 47 species
Msp_g25383 RST1 regulatory cofactor *(RST1) of exosome complex &... 0.03 OrthoFinder output from all 47 species
Sam_g11649 No alias regulatory cofactor *(RST1) of exosome complex &... 0.03 OrthoFinder output from all 47 species
Spa_g09091 RST1 regulatory cofactor *(RST1) of exosome complex &... 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003678 DNA helicase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0005049 nuclear export signal receptor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008134 transcription factor binding IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0017025 TBP-class protein binding IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140142 nucleocytoplasmic carrier activity IEP HCCA
MF GO:0140296 general transcription initiation factor binding IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR022542 FOCAD/RST1_DUF3730 550 739
IPR022542 FOCAD/RST1_DUF3730 91 329
No external refs found!