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  5. Solyc07g008530.1.1

Solyc07g008530.1.1 (Solyc07g008530.1)


Aliases : Solyc07g008530.1

Description : 29.1.1 protein.aa activation.tyrosine-tRNA ligase EMBRYO DEFECTIVE 2768 (emb2768)


Gene families : OG_01_0006074 (Gene family) Phylogenetic Tree(s): OG0006074_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc07g008530.1.1
Cluster HCCA cluster: Cluster_245

Target Alias Description ECC score Gene Family Method Actions
Cre13.g606050 No alias 29.1.1 protein.aa activation.tyrosine-tRNA ligase EMBRYO... 0.02 Gene family
LOC_Os01g31610 Os01g0500900 29.1.1 protein.aa activation.tyrosine-tRNA ligase EMBRYO... 0.03 Gene family
MA_766311g0010 No alias 29.1.1 protein.aa activation.tyrosine-tRNA ligase EMBRYO... 0.04 Gene family
Zm00001d003430 GRMZM2G012404 29.1.1 protein.aa activation.tyrosine-tRNA ligase EMBRYO... 0.04 Gene family

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA InterProScan
MF GO:0004812 aminoacyl-tRNA ligase activity IEA InterProScan
MF GO:0005524 ATP binding IEA InterProScan
BP GO:0006418 tRNA aminoacylation for protein translation IEA InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002942 S4_RNA-bd 457 501
IPR002305 aa-tRNA-synth_Ic 108 419
No external refs found!