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  5. Ceric.12G017000.1

Ceric.12G017000.1 (ATPIN4, PIN4, Ceric.12G017000)


Aliases : ATPIN4, PIN4, Ceric.12G017000

Description : auxin efflux transporter *(PIN) & original description: pacid=50602482 polypeptide=Ceric.12G017000.1.p locus=Ceric.12G017000 ID=Ceric.12G017000.1.v2.1 annot-version=v2.1


Gene families : OG0000569 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000569_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.12G017000.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00241000 PIN5,... Solute transport.carrier-mediated transport.BART... 0.03 OrthoFinder output from all 47 species
Aev_g39537 ATPIN1, PIN1 auxin efflux transporter *(PIN) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g38942 PIN3, ATPIN3 auxin efflux transporter *(PIN) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01011755001 No alias Solute transport.carrier-mediated transport.BART... 0.03 OrthoFinder output from all 47 species
GSVIVT01011756001 PIN3, ATPIN3 Solute transport.carrier-mediated transport.BART... 0.04 OrthoFinder output from all 47 species
Mp3g21660.1 ATPIN4, PIN4 auxin transporter (PIN). auxin efflux transporter (PIN) 0.01 OrthoFinder output from all 47 species
Ore_g27942 ATPIN1, PIN1 auxin efflux transporter *(PIN) & original description: none 0.03 OrthoFinder output from all 47 species
Smo119024 EIR1, WAV6,... Solute transport.carrier-mediated transport.BART... 0.02 OrthoFinder output from all 47 species
Zm00001e018835_P004 PIN5, Zm00001e018835 auxin transporter (PIN). auxin efflux transporter (PIN) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
InterPro domains Description Start Stop
IPR004776 Mem_trans 10 671
No external refs found!