- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : Ceric.11G088100
Description : regulatory protein *(TIC) of circadian clock & original description: pacid=50596370 polypeptide=Ceric.11G088100.1.p locus=Ceric.11G088100 ID=Ceric.11G088100.1.v2.1 annot-version=v2.1
Gene families : OG0000917 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000917_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Ceric.11G088100.1 | |
| Cluster | HCCA: Cluster_121 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00066p00076200 | TIC,... | Multi-process regulation.circadian clock.TIC circadian... | 0.03 | OrthoFinder output from all 47 species | |
| AT3G22380 | TIC | time for coffee | 0.09 | OrthoFinder output from all 47 species | |
| Adi_g023031 | No alias | regulatory protein *(TIC) of circAdian clock & original... | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g066096 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Adi_g109820 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g11511 | TIC | regulatory protein *(TIC) of circadian clock & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g12589 | No alias | regulatory protein *(TIC) of circadian clock & original... | 0.07 | OrthoFinder output from all 47 species | |
| Aob_g24227 | No alias | regulatory protein *(TIC) of circadian clock & original... | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0015.g013810 | No alias | regulatory protein *(TIC) of circadian clock & original... | 0.05 | OrthoFinder output from all 47 species | |
| Azfi_s0476.g073010 | No alias | regulatory protein *(TIC) of circadian clock & original... | 0.05 | OrthoFinder output from all 47 species | |
| Cba_g72970 | No alias | regulatory protein *(TIC) of circadian clock & original... | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g78003 | No alias | regulatory protein *(TIC) of circadian clock & original... | 0.05 | OrthoFinder output from all 47 species | |
| Ehy_g16139 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g17052 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Ehy_g18278 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01001149001 | TIC | Multi-process regulation.circadian clock.TIC circadian... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01017938001 | TIC | Multi-process regulation.circadian clock.TIC circadian... | 0.09 | OrthoFinder output from all 47 species | |
| Gb_04775 | No alias | circadian clock regulator (TIC) | 0.1 | OrthoFinder output from all 47 species | |
| Len_g30742 | No alias | regulatory protein *(TIC) of circadian clock & original... | 0.06 | OrthoFinder output from all 47 species | |
| Lfl_g27240 | No alias | regulatory protein *(TIC) of circadian clock & original... | 0.09 | OrthoFinder output from all 47 species | |
| Mp4g11470.1 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g44195 | No alias | regulatory protein *(TIC) of circadian clock & original... | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g02487 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ore_g04817 | No alias | regulatory protein *(TIC) of circadian clock & original... | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g16133 | No alias | regulatory protein *(TIC) of circadian clock & original... | 0.07 | OrthoFinder output from all 47 species | |
| Ore_g21131 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Pir_g37115 | TIC | regulatory protein *(TIC) of circadian clock & original... | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g33166 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g25564 | No alias | regulatory protein *(TIC) of circadian clock & original... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc09g075830.3.1 | TIC, Solyc09g075830 | circadian clock regulator (TIC) | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g48040 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | IEP | HCCA |
| BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
| BP | GO:0006886 | intracellular protein transport | IEP | HCCA |
| MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| MF | GO:0019899 | enzyme binding | IEP | HCCA |
| MF | GO:0031267 | small GTPase binding | IEP | HCCA |
| MF | GO:0051020 | GTPase binding | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
| MF | GO:0140658 | ATP-dependent chromatin remodeler activity | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |