1. Home
  2. Species
  3. Ceratopteris richardii
  4. Sequence
  5. Ceric.11G056400.1

Ceric.11G056400.1 (Ceric.11G056400)


Aliases : Ceric.11G056400

Description : component *(ECHIDNA) of trans-Golgi-network (TGN) trafficking complex & original description: pacid=50596084 polypeptide=Ceric.11G056400.1.p locus=Ceric.11G056400 ID=Ceric.11G056400.1.v2.1 annot-version=v2.1


Gene families : OG0003195 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003195_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.11G056400.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00212990 evm_27.TU.AmTr_v1... Vesicle trafficking.endomembrane... 0.06 OrthoFinder output from all 47 species
Adi_g046374 No alias component *(ECHIDNA) of trans-Golgi-network (TGN)... 0.03 OrthoFinder output from all 47 species
Ala_g13162 No alias component *(ECHIDNA) of trans-Golgi-network (TGN)... 0.03 OrthoFinder output from all 47 species
Aop_g00185 No alias component *(ECHIDNA) of trans-Golgi-network (TGN)... 0.04 OrthoFinder output from all 47 species
Dac_g01913 No alias component *(ECHIDNA) of trans-Golgi-network (TGN)... 0.04 OrthoFinder output from all 47 species
Dcu_g45919 No alias component *(ECHIDNA) of trans-Golgi-network (TGN)... 0.04 OrthoFinder output from all 47 species
LOC_Os05g06700.1 LOC_Os05g06700 ECHIDNA protein of trans-Golgi-network (TGN) trafficking 0.05 OrthoFinder output from all 47 species
MA_10435880g0020 No alias ECHIDNA protein of trans-Golgi-network (TGN) trafficking 0.02 OrthoFinder output from all 47 species
MA_8217282g0010 No alias ECHIDNA protein of trans-Golgi-network (TGN) trafficking 0.02 OrthoFinder output from all 47 species
Msp_g45527 No alias component *(ECHIDNA) of trans-Golgi-network (TGN)... 0.04 OrthoFinder output from all 47 species
Ore_g06892 No alias component *(ECHIDNA) of trans-Golgi-network (TGN)... 0.03 OrthoFinder output from all 47 species
Pir_g00840 No alias component *(ECHIDNA) of trans-Golgi-network (TGN)... 0.02 OrthoFinder output from all 47 species
Pnu_g05057 No alias component *(ECHIDNA) of trans-Golgi-network (TGN)... 0.03 OrthoFinder output from all 47 species
Solyc06g073270.4.1 Solyc06g073270 ECHIDNA protein of trans-Golgi-network (TGN) trafficking 0.04 OrthoFinder output from all 47 species
Spa_g11569 No alias component *(ECHIDNA) of trans-Golgi-network (TGN)... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004427 inorganic diphosphate phosphatase activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0005048 signal sequence binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006621 protein retention in ER lumen IEP HCCA
BP GO:0006643 membrane lipid metabolic process IEP HCCA
BP GO:0006665 sphingolipid metabolic process IEP HCCA
BP GO:0006672 ceramide metabolic process IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
BP GO:0032507 maintenance of protein location in cell IEP HCCA
MF GO:0033218 amide binding IEP HCCA
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP HCCA
MF GO:0042277 peptide binding IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0045185 maintenance of protein location IEP HCCA
MF GO:0046923 ER retention sequence binding IEP HCCA
BP GO:0051235 maintenance of location IEP HCCA
BP GO:0051651 maintenance of location in cell IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0072595 maintenance of protein localization in organelle IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
InterPro domains Description Start Stop
IPR008564 TVP23-like 9 148
No external refs found!