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  5. Ceric.11G023000.1

Ceric.11G023000.1 (Ceric.11G023000)


Aliases : Ceric.11G023000

Description : E3 ubiquitin ligase & original description: pacid=50596695 polypeptide=Ceric.11G023000.1.p locus=Ceric.11G023000 ID=Ceric.11G023000.1.v2.1 annot-version=v2.1


Gene families : OG0000370 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000370_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.11G023000.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00066p00203490 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
AT4G02075 PIT1 RING/FYVE/PHD zinc finger superfamily protein 0.06 OrthoFinder output from all 47 species
Adi_g125698 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g21088 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g05081 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g01110 No alias E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Gb_37740 No alias RING-v-class E3 ligase 0.04 OrthoFinder output from all 47 species
LOC_Os01g49280.1 LOC_Os01g49280 RING-v-class E3 ligase 0.03 OrthoFinder output from all 47 species
Len_g08617 No alias E3 ubiquitin ligase & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g000908 No alias E3 ubiquitin ligase & original description: CDS=1-1032 0.03 OrthoFinder output from all 47 species
Solyc01g079530.4.1 Solyc01g079530 RING-v-class E3 ligase 0.04 OrthoFinder output from all 47 species
Solyc03g116030.4.1 Solyc03g116030 RING-v-class E3 ligase 0.03 OrthoFinder output from all 47 species
Solyc06g069780.4.1 Solyc06g069780 RING-v-class E3 ligase 0.03 OrthoFinder output from all 47 species
Zm00001e014915_P002 Zm00001e014915 RING-v-class E3 ligase 0.03 OrthoFinder output from all 47 species
Zm00001e028572_P001 Zm00001e028572 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
InterPro domains Description Start Stop
IPR022143 DUF3675 165 281
IPR011016 Znf_RING-CH 113 158
No external refs found!