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  5. Ceric.11G021600.1

Ceric.11G021600.1 (Ceric.11G021600)


Aliases : Ceric.11G021600

Description : BBX class-IV transcription factor & original description: pacid=50595949 polypeptide=Ceric.11G021600.1.p locus=Ceric.11G021600 ID=Ceric.11G021600.1.v2.1 annot-version=v2.1


Gene families : OG0000403 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000403_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.11G021600.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00250410 LZF1, STH3,... RNA biosynthesis.transcriptional activation.C2C2... 0.04 OrthoFinder output from all 47 species
AMTR_s00182p00043350 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.05 OrthoFinder output from all 47 species
AT1G75540 STH2 salt tolerance homolog2 0.03 OrthoFinder output from all 47 species
AT4G38960 No alias B-box type zinc finger family protein 0.03 OrthoFinder output from all 47 species
Adi_g057497 LZF1, STH3, DBB3 BBX class-IV transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g36004 STO not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g11974 LZF1, STH3, DBB3 BBX class-IV transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.1Z197300.1 LZF1, STH3,... BBX class-IV transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ceric.33G017400.1 STO, Ceric.33G017400 BBX class-IV transcription factor & original... 0.05 OrthoFinder output from all 47 species
Ehy_g26676 LZF1, STH3, DBB3 BBX class-IV transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os02g39360.1 STH, LOC_Os02g39360 transcription factor (BBX-DBB) 0.03 OrthoFinder output from all 47 species
LOC_Os02g43170.1 LOC_Os02g43170 transcription factor (BBX-DBB) 0.04 OrthoFinder output from all 47 species
LOC_Os04g41560.2 STO, LOC_Os04g41560 transcription factor (BBX-DBB) 0.02 OrthoFinder output from all 47 species
LOC_Os06g49880.1 STH2, LOC_Os06g49880 transcription factor (BBX-DBB) 0.04 OrthoFinder output from all 47 species
LOC_Os09g35880.1 LOC_Os09g35880 transcription factor (BBX-DBB) 0.03 OrthoFinder output from all 47 species
LOC_Os12g10660.1 LZF1, STH3,... transcription factor (BBX-DBB) 0.04 OrthoFinder output from all 47 species
Len_g59223 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g28592 STO BBX class-IV transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g37373 STO BBX class-IV transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g65956 No alias BBX class-IV transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g20549 No alias BBX class-IV transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g41002 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g56808 STO BBX class-IV transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g56814 No alias BBX class-IV transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e007720_P001 STO, Zm00001e007720 transcription factor (BBX-DBB) 0.06 OrthoFinder output from all 47 species
Zm00001e016532_P001 LZF1, STH3,... transcription factor (BBX-DBB) 0.03 OrthoFinder output from all 47 species
Zm00001e022915_P001 STO, Zm00001e022915 transcription factor (BBX-DBB) 0.05 OrthoFinder output from all 47 species
Zm00001e041335_P001 Zm00001e041335 transcription factor (BBX-DBB) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000315 Znf_B-box 4 42
IPR000315 Znf_B-box 54 95
No external refs found!