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  5. Ceric.10G083800.1

Ceric.10G083800.1 (EMB1968, RFC4, Ceric.10G083800)


Aliases : EMB1968, RFC4, Ceric.10G083800

Description : component *(RFC4) of PCNA sliding clamp loader complex & original description: pacid=50612257 polypeptide=Ceric.10G083800.1.p locus=Ceric.10G083800 ID=Ceric.10G083800.1.v2.1 annot-version=v2.1


Gene families : OG0006776 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006776_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.10G083800.1
Cluster HCCA: Cluster_142

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0032.g024950 EMB1968, RFC4 component *(RFC4) of PCNA sliding clamp loader complex &... 0.04 OrthoFinder output from all 47 species
Cre06.g251800 EMB1968, RFC4 Cell cycle.interphase.DNA... 0.04 OrthoFinder output from all 47 species
Mp1g11310.1 EMB1968, RFC4 component RFC4 of PCNA sliding clamp loader complex 0.02 OrthoFinder output from all 47 species
Sam_g16914 No alias component *(RFC4) of PCNA sliding clamp loader complex &... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATP hydrolysis activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000725 recombinational repair IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0004620 phospholipase activity IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006310 DNA recombination IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008081 phosphoric diester hydrolase activity IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0016298 lipase activity IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0050290 sphingomyelin phosphodiesterase D activity IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR013748 Rep_factorC_C 246 321
IPR003959 ATPase_AAA_core 45 170
No external refs found!