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  5. Ceric.10G065900.1

Ceric.10G065900.1 (Ceric.10G065900)


Aliases : Ceric.10G065900

Description : not classified & original description: pacid=50613278 polypeptide=Ceric.10G065900.1.p locus=Ceric.10G065900 ID=Ceric.10G065900.1.v2.1 annot-version=v2.1


Gene families : OG0006136 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006136_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.10G065900.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g015300 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G079000.1 Ceric.01G079000 not classified & original description: pacid=50590763... 0.02 OrthoFinder output from all 47 species
Dcu_g15187 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g08866 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g09687 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g16853 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008081 phosphoric diester hydrolase activity IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 656 680
IPR002885 Pentatricopeptide_repeat 615 645
IPR002885 Pentatricopeptide_repeat 515 539
IPR002885 Pentatricopeptide_repeat 234 282
IPR002885 Pentatricopeptide_repeat 687 719
No external refs found!