Ceric.10G035800.1 (Ceric.10G035800)

Aliases : Ceric.10G035800

Description : component *(bL25m) of large mitoribosomal-subunit proteome & original description: pacid=50611654 polypeptide=Ceric.10G035800.1.p locus=Ceric.10G035800 ID=Ceric.10G035800.1.v2.1 annot-version=v2.1

Gene families : OG0004497 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004497_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ceric.10G035800.1
Cluster	HCCA: Cluster_155

Target	Alias	Description	ECC score	Gene Family Method
AT4G23620	No alias	Ribosomal protein L25/Gln-tRNA synthetase,...	0.04	OrthoFinder output from all 47 species
AT5G66860	No alias	Ribosomal protein L25/Gln-tRNA synthetase,...	0.06	OrthoFinder output from all 47 species
Aob_g01079	No alias	component *(bL25m) of large mitoribosomal-subunit...	0.02	OrthoFinder output from all 47 species
Cre02.g081450	No alias	No description available	0.04	OrthoFinder output from all 47 species
Gb_31467	No alias	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
LOC_Os01g41030.1	LOC_Os01g41030	no hits & (original description: none)	0.08	OrthoFinder output from all 47 species
LOC_Os05g18750.1	LOC_Os05g18750	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Mp5g00210.1	No alias	no hits & (original description: none)	0.05	OrthoFinder output from all 47 species
Sam_g12892	No alias	component *(bL25m) of large mitoribosomal-subunit...	0.05	OrthoFinder output from all 47 species
Smo409933	No alias	No description available	0.02	OrthoFinder output from all 47 species
Solyc02g090420.2.1	Solyc02g090420	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Solyc11g018560.2.1	Solyc11g018560	no hits & (original description: none)	0.05	OrthoFinder output from all 47 species
Zm00001e012441_P002	Zm00001e012441	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species
Zm00001e027819_P001	Zm00001e027819	no hits & (original description: none)	0.06	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
MF	GO:0008097	5S rRNA binding	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019843	rRNA binding	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	IEP	HCCA
MF	GO:0004177	aminopeptidase activity	IEP	HCCA
MF	GO:0008235	metalloexopeptidase activity	IEP	HCCA
MF	GO:0008237	metallopeptidase activity	IEP	HCCA
MF	GO:0008238	exopeptidase activity	IEP	HCCA
MF	GO:0016859	cis-trans isomerase activity	IEP	HCCA
MF	GO:0030145	manganese ion binding	IEP	HCCA
MF	GO:0070006	metalloaminopeptidase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR029751	Ribosomal_L25	73	174
IPR020057	Ribosomal_L25_b-dom	182	266

External Links

No external refs found!

Ceric.10G035800.1 (Ceric.10G035800)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation