Solyc07g006630.3.1 (Solyc07g006630.3)


Aliases : Solyc07g006630.3

Description : 27.3.7 RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family CONSTANS-like 5 (COL5)


Gene families : OG_01_0000267 (Gene family) Phylogenetic Tree(s): OG0000267_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc07g006630.3.1
Cluster HCCA cluster: Cluster_236

Target Alias Description ECC score Gene Family Method Actions
AT3G02380 COL2, ATCOL2 CONSTANS-like 2 0.03 Gene family
AT5G15850 COL1, ATCOL1 CONSTANS-like 1 0.03 Gene family
AT5G24930 ATCOL4, COL4 CONSTANS-like 4 0.03 Gene family
Cre06.g278159 No alias 27.3.7 RNA.regulation of transcription.C2C2(Zn) CO-like,... 0.02 Gene family
Cre12.g534100 No alias No description available 0.05 Gene family
GSVIVT01029107001 No alias 27.3.7 RNA.regulation of transcription.C2C2(Zn) CO-like,... 0.03 Gene family
GSVIVT01036037001 No alias 27.3.7 RNA.regulation of transcription.C2C2(Zn) CO-like,... 0.02 Gene family
GSVIVT01036499001 No alias No description available 0.03 Gene family
LOC_Os04g42020 Os04g0497700 27.3.7 RNA.regulation of transcription.C2C2(Zn) CO-like,... 0.02 Gene family
LOC_Os06g44450 Os06g0654900 27.3.7 RNA.regulation of transcription.C2C2(Zn) CO-like,... 0.01 Gene family
LOC_Os09g06464 Os09g0240200 33.99 development.unspecified homologous to the... 0.02 Gene family
LOC_Os10g41100 Os10g0560400 No description available 0.01 Gene family
Smo102902 PACid_15409870 No description available 0.04 Gene family
Solyc02g089540.3.1 Solyc02g089540.3 33.99 development.unspecified Homologous to the... 0.02 Gene family
Zm00001d029885 GRMZM2G154580 No description available 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR010402 CCT_domain 307 349
IPR000315 Znf_B-box 25 61
IPR000315 Znf_B-box 60 106
No external refs found!