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  5. Ceric.10G018800.1

Ceric.10G018800.1 (RH39, Ceric.10G018800)


Aliases : RH39, Ceric.10G018800

Description : 23S-rRNA maturation helicase *(RH39) & original description: pacid=50611770 polypeptide=Ceric.10G018800.1.p locus=Ceric.10G018800 ID=Ceric.10G018800.1.v2.1 annot-version=v2.1


Gene families : OG0007220 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007220_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.10G018800.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00078p00161460 RH39,... DEAD-box ATP-dependent RNA helicase 39 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
AT4G09730 RH39 RH39 0.07 OrthoFinder output from all 47 species
Als_g15873 RH39 23S-rRNA maturation helicase *(RH39) & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0006.g009538 RH39 23S-rRNA maturation helicase *(RH39) & original... 0.03 OrthoFinder output from all 47 species
Cba_g02647 RH39 23S-rRNA maturation helicase *(RH39) & original description: none 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020961.8 RH39 DEAD-box ATP-dependent RNA helicase 39 OS=Oryza sativa... 0.01 OrthoFinder output from all 47 species
Cre01.g033832 RH39 DEAD-box ATP-dependent RNA helicase 39 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
Dcu_g14154 RH39 23S-rRNA maturation helicase *(RH39) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g26269 RH39 23S-rRNA maturation helicase *(RH39) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g15141 RH39 23S-rRNA maturation helicase *(RH39) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01013702001 RH39 DEAD-box ATP-dependent RNA helicase 39 OS=Oryza sativa... 0.04 OrthoFinder output from all 47 species
Gb_33379 RH39 DEAD-box ATP-dependent RNA helicase 39 OS=Oryza sativa... 0.06 OrthoFinder output from all 47 species
Mp5g09580.1 RH39 DEAD-box ATP-dependent RNA helicase 39 OS=Oryza sativa... 0.05 OrthoFinder output from all 47 species
Nbi_g37282 RH39 23S-rRNA maturation helicase *(RH39) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g14534 RH39 23S-rRNA maturation helicase *(RH39) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001993 RH39 23S-rRNA maturation helicase *(RH39) & original... 0.04 OrthoFinder output from all 47 species
Solyc12g056740.2.1 RH39, Solyc12g056740 DEAD-box ATP-dependent RNA helicase 39 OS=Oryza sativa... 0.04 OrthoFinder output from all 47 species
Spa_g05661 RH39 23S-rRNA maturation helicase *(RH39) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e029916_P001 RH39, Zm00001e029916 DEAD-box ATP-dependent RNA helicase 39 OS=Oryza sativa... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003852 2-isopropylmalate synthase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006551 leucine metabolic process IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006787 porphyrin-containing compound catabolic process IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009081 branched-chain amino acid metabolic process IEP HCCA
BP GO:0009082 branched-chain amino acid biosynthetic process IEP HCCA
BP GO:0009098 leucine biosynthetic process IEP HCCA
BP GO:0015994 chlorophyll metabolic process IEP HCCA
BP GO:0015996 chlorophyll catabolic process IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033015 tetrapyrrole catabolic process IEP HCCA
BP GO:0042440 pigment metabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0046149 pigment catabolic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
MF GO:0046912 acyltransferase activity, acyl groups converted into alkyl on transfer IEP HCCA
MF GO:0047746 chlorophyllase activity IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001650 Helicase_C 390 501
IPR011545 DEAD/DEAH_box_helicase_dom 171 354
No external refs found!