1. Home
  2. Species
  3. Ceratopteris richardii
  4. Sequence
  5. Ceric.10G010200.1

Ceric.10G010200.1 (Ceric.10G010200)


Aliases : Ceric.10G010200

Description : not classified & original description: pacid=50612946 polypeptide=Ceric.10G010200.1.p locus=Ceric.10G010200 ID=Ceric.10G010200.1.v2.1 annot-version=v2.1


Gene families : OG0000092 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000092_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.10G010200.1
Cluster HCCA: Cluster_46

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00217990 evm_27.TU.AmTr_v1... U-box domain-containing protein 16 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00086p00031680 evm_27.TU.AmTr_v1... U-box domain-containing protein 4 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00153p00035720 ATPUB17, PUB17,... U-box domain-containing protein 1 OS=Medicago truncatula 0.03 OrthoFinder output from all 47 species
AT1G10560 PUB18, ATPUB18 plant U-box 18 0.04 OrthoFinder output from all 47 species
AT1G23030 No alias ARM repeat superfamily protein 0.05 OrthoFinder output from all 47 species
Adi_g019046 ATPUB17, PUB17 E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g026489 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g080188 ATPUB17, PUB17 E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g102535 ATPUB17, PUB17 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g09883 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g04410 PUB14, ATPUB14 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g06664 PUB13, ATPUB13 E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Als_g16594 PUB14, ATPUB14 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g16654 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g00484 PUB8, B80 E3 ubiquitin ligase *(PUB8) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g05074 PUB14, ATPUB14 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g60695 ATPUB17, PUB17 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene33577.t1 PUB14, ATPUB14,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene44181.t1 ATPUB17, PUB17,... E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene44182.t1 ATPUB17, PUB17,... E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene44183.t1 ATPUB17, PUB17,... E3 ubiquitin ligase & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene44184.t1 ATPUB17, PUB17,... E3 ubiquitin ligase & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene44185.t1 ATPUB17, PUB17,... E3 ubiquitin ligase & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene59239.t1 PUB14, ATPUB14,... not classified & original description: none 0.06 OrthoFinder output from all 47 species
Azfi_s0110.g045492 ATPUB17, PUB17 not classified & original description: CDS=1-2295 0.03 OrthoFinder output from all 47 species
Ceric.13G093000.1 ATPUB17, PUB17,... not classified & original description: pacid=50635700... 0.07 OrthoFinder output from all 47 species
Dac_g12067 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g12068 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g26575 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g26730 PUB13, ATPUB13 E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g06164 ATPUB17, PUB17 not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01006112001 PUB8, B80 U-box domain-containing protein 8 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Gb_08792 ATPUB17, PUB17 U-box domain-containing protein 1 OS=Medicago truncatula... 0.03 OrthoFinder output from all 47 species
Gb_24091 PUB9, ATPUB9 U-box domain-containing protein 14 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
LOC_Os01g72600.1 LOC_Os01g72600 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os05g39930.1 LOC_Os05g39930 U-box domain-containing protein 16 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Len_g20959 PUB13, ATPUB13 E3 ubiquitin ligase & original description: none 0.05 OrthoFinder output from all 47 species
MA_69133g0010 PUB14, ATPUB14 E3 ubiquitin ligase (PUB) 0.02 OrthoFinder output from all 47 species
MA_8993116g0010 ATPUB17, PUB17 E3 ubiquitin ligase (PUB) 0.04 OrthoFinder output from all 47 species
Ore_g25238 ATPUB17, PUB17 E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g34477 ATPUB17, PUB17 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g11319 PUB13, ATPUB13 E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g30846 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Solyc02g072080.1.1 ATPUB17, PUB17,... U-box domain-containing protein 17 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc04g077850.3.1 Solyc04g077850 U-box domain-containing protein 4 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Spa_g05552 ATPUB17, PUB17 E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g11467 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g11468 PUB14, ATPUB14 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e014377_P001 ATPUB17, PUB17,... U-box domain-containing protein 4 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
Zm00001e018578_P001 Zm00001e018578 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e019429_P001 Zm00001e019429 U-box domain-containing protein 16 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e028839_P001 Zm00001e028839 U-box domain-containing protein 16 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Zm00001e034012_P001 Zm00001e034012 E3 ubiquitin ligase (PUB) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA Interproscan
BP GO:0016567 protein ubiquitination IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004089 carbonate dehydratase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
InterPro domains Description Start Stop
IPR003613 Ubox_domain 292 364
No external refs found!