- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : Ceric.10G009900
Description : E3 ubiquitin ligase *(RMA/MUSE) & original description: pacid=50612603 polypeptide=Ceric.10G009900.1.p locus=Ceric.10G009900 ID=Ceric.10G009900.1.v2.1 annot-version=v2.1
Gene families : OG0000266 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000266_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00009p00264430 | evm_27.TU.AmTr_v1... | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00059p00153580 | evm_27.TU.AmTr_v1... | Protein degradation.peptide tagging.Ubiquitin... | 0.04 | OrthoFinder output from all 47 species | |
| AT4G28270 | ATRMA2, RMA2 | RING membrane-anchor 2 | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g012747 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g024921 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g039742 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g072154 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| Adi_g101989 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Aev_g09554 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g05095 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g16158 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000545.1 | No alias | No description available | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g35852 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g18993 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| GSVIVT01002819001 | RMA3, ATRMA3 | Protein degradation.peptide tagging.Ubiquitin... | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01014361001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os02g42690.3 | LOC_Os02g42690 | RING-HC-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g13801 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Nbi_g26676 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Pir_g41418 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0042.g012732 | RMA3, ATRMA3 | E3 ubiquitin ligase *(RMA/MUSE) & original description: CDS=1-450 | 0.04 | OrthoFinder output from all 47 species | |
| Solyc07g054080.3.1 | RMA1, ATRMA1,... | RING-HC-class E3 ligase | 0.05 | OrthoFinder output from all 47 species | |
| Solyc10g008400.1.1 | RMA1, ATRMA1,... | RING-HC-class E3 ligase | 0.1 | OrthoFinder output from all 47 species | |
| Solyc12g010670.1.1 | RMA3, ATRMA3,... | RING-HC-class E3 ligase | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g03199 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g05542 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e003329_P001 | Zm00001e003329 | RING-HC-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e007434_P001 | RMA3, ATRMA3,... | RING-HC-class E3 ligase | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e041298_P002 | RMA1, ATRMA1,... | RING-HC-class E3 ligase | 0.07 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR027370 | Znf-RING_euk | 27 | 70 |
| No external refs found! |