1. Home
  2. Species
  3. Ceratopteris richardii
  4. Sequence
  5. Ceric.10G009800.1

Ceric.10G009800.1 (Ceric.10G009800)


Aliases : Ceric.10G009800

Description : E3 ubiquitin ligase *(RMA/MUSE) & original description: pacid=50611709 polypeptide=Ceric.10G009800.1.p locus=Ceric.10G009800 ID=Ceric.10G009800.1.v2.1 annot-version=v2.1


Gene families : OG0000266 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000266_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.10G009800.1

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01002819001 RMA3, ATRMA3 Protein degradation.peptide tagging.Ubiquitin... 0.06 OrthoFinder output from all 47 species
LOC_Os01g56070.3 LOC_Os01g56070 RING-HC-class E3 ligase 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0073.g017142 No alias E3 ubiquitin ligase *(RMA/MUSE) & original description:... 0.03 OrthoFinder output from all 47 species
Sam_g24563 No alias E3 ubiquitin ligase *(RMA/MUSE) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g45037 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g089870.3.1 Solyc02g089870 RING-HC-class E3 ligase 0.06 OrthoFinder output from all 47 species
Spa_g19950 No alias E3 ubiquitin ligase *(RMA/MUSE) & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
InterPro domains Description Start Stop
IPR026960 RVT-Znf 17 94
No external refs found!