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  5. Solyc07g006400.2.1

Solyc07g006400.2.1 (Solyc07g006400.2)


Aliases : Solyc07g006400.2

Description : 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING RING/U-box superfamily protein


Gene families : OG_01_0000002 (Gene family) Phylogenetic Tree(s): OG0000002_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc07g006400.2.1
Cluster HCCA cluster: Cluster_230

Target Alias Description ECC score Gene Family Method Actions
AT1G49220 No alias RING/U-box superfamily protein 0.09 Gene family
AT1G74410 No alias RING/U-box superfamily protein 0.06 Gene family
AT2G37580 No alias RING/U-box superfamily protein 0.02 Gene family
AT3G05200 ATL6 RING/U-box superfamily protein 0.03 Gene family
AT4G17905 ATL4H RING/U-box superfamily protein 0.02 Gene family
GSVIVT01000015001 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
GSVIVT01008756001 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
GSVIVT01022306001 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.04 Gene family
LOC_Os01g60730 Os01g0822800 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.01 Gene family
LOC_Os02g36330 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
LOC_Os02g52210 Os02g0759400 No description available 0.02 Gene family
LOC_Os05g39260 Os05g0468900 No description available 0.04 Gene family
LOC_Os06g09310 Os06g0192800 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.01 Gene family
LOC_Os08g43670 Os08g0550400 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.01 Gene family
LOC_Os12g24490 Os12g0432600 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING E3... 0.01 Gene family
MA_10436208g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.11 Gene family
MA_6208058g0010 No alias 2.2.1.5 major CHO metabolism.degradation.sucrose.Susy... 0.01 Gene family
Smo109459 PACid_15404203 No description available 0.09 Gene family
Smo121181 PACid_15415477 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.01 Gene family
Smo137213 PACid_15418424 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.09 Gene family
Smo8844 PACid_15408158 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.01 Gene family
Solyc01g066430.3.1 Solyc01g066430.3 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Solyc02g082420.3.1 Solyc02g082420.3 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING ATL8 0.07 Gene family
Solyc02g083400.3.1 Solyc02g083400.3 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Solyc03g114190.1.1 Solyc03g114190.1 No description available 0.02 Gene family
Solyc10g081780.2.1 Solyc10g081780.2 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.01 Gene family
Zm00001d000390 GRMZM2G312078 No description available 0.01 Gene family
Zm00001d002491 GRMZM2G090279 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Zm00001d003497 GRMZM2G171277 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Zm00001d018823 GRMZM2G029623 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.11 Gene family
Zm00001d031880 No alias No description available 0.01 Gene family
Zm00001d037023 GRMZM2G447566 No description available 0.03 Gene family
Zm00001d038420 GRMZM2G075782 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.05 Gene family
Zm00001d047068 GRMZM2G368765 No description available 0.01 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001841 Znf_RING 114 157
No external refs found!