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  5. Ceric.09G096600.1

Ceric.09G096600.1 (ATRABF1, RABF1, ARA6,...)


Aliases : ATRABF1, RABF1, ARA6, ATRAB5C, ARA-6, Ceric.09G096600

Description : vesicle tethering small GTPase *(RAB5) & original description: pacid=50587864 polypeptide=Ceric.09G096600.1.p locus=Ceric.09G096600 ID=Ceric.09G096600.1.v2.1 annot-version=v2.1


Gene families : OG0007224 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007224_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.09G096600.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00072p00165050 ATRABF1, RABF1,... Vesicle trafficking.regulation of membrane tethering and... 0.03 OrthoFinder output from all 47 species
Adi_g048971 ATRABF1, RABF1,... vesicle tethering small GTPase *(RAB5) & original... 0.03 OrthoFinder output from all 47 species
Ala_g13809 ATRABF1, RABF1,... vesicle tethering small GTPase *(RAB5) & original... 0.07 OrthoFinder output from all 47 species
Als_g01363 ATRABF1, RABF1,... vesicle tethering small GTPase *(RAB5) & original... 0.03 OrthoFinder output from all 47 species
Aop_g06217 ATRABF1, RABF1,... vesicle tethering small GTPase *(RAB5) & original... 0.06 OrthoFinder output from all 47 species
Azfi_s0167.g054550 ATRABF1, RABF1,... vesicle tethering small GTPase *(RAB5) & original... 0.03 OrthoFinder output from all 47 species
Len_g41262 ATRABF1, RABF1,... vesicle tethering small GTPase *(RAB5) & original... 0.03 OrthoFinder output from all 47 species
Nbi_g42869 ATRABF1, RABF1,... vesicle tethering small GTPase *(RAB5) & original... 0.03 OrthoFinder output from all 47 species
Spa_g23602 ATRABF1, RABF1,... vesicle tethering small GTPase *(RAB5) & original... 0.03 OrthoFinder output from all 47 species
Tin_g01538 ATRABF1, RABF1,... vesicle tethering small GTPase *(RAB5) & original... 0.05 OrthoFinder output from all 47 species
Zm00001e038988_P002 ATRABF1, RABF1,... F-class RAB GTPase 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
MF GO:0008408 3'-5' exonuclease activity IEP HCCA
MF GO:0016854 racemase and epimerase activity IEP HCCA
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP HCCA
InterPro domains Description Start Stop
IPR001806 Small_GTPase 29 189
No external refs found!