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  5. Ceric.09G082800.1

Ceric.09G082800.1 (Ceric.09G082800)


Aliases : Ceric.09G082800

Description : not classified & original description: pacid=50587508 polypeptide=Ceric.09G082800.1.p locus=Ceric.09G082800 ID=Ceric.09G082800.1.v2.1 annot-version=v2.1


Gene families : OG0000142 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000142_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.09G082800.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00044p00153760 evm_27.TU.AmTr_v1... Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
AMTR_s00119p00084460 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g27800,... 0.03 OrthoFinder output from all 47 species
AMTR_s00142p00073110 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g73400,... 0.03 OrthoFinder output from all 47 species
AT1G74900 OTP43 Pentatricopeptide repeat (PPR) superfamily protein 0.04 OrthoFinder output from all 47 species
Adi_g012989 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g059638 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g11133 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g02658 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g78360 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000737.24 No alias No description available 0.01 OrthoFinder output from all 47 species
Dac_g07047 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g07514 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g10060 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g11222 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08151 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01008815001 No alias Pentatricopeptide repeat-containing protein At1g77360,... 0.02 OrthoFinder output from all 47 species
GSVIVT01015982001 No alias Pentatricopeptide repeat-containing protein At1g80880,... 0.02 OrthoFinder output from all 47 species
GSVIVT01017111001 No alias Pentatricopeptide repeat-containing protein At3g16010... 0.02 OrthoFinder output from all 47 species
GSVIVT01027388001 No alias Pentatricopeptide repeat-containing protein At1g80550,... 0.02 OrthoFinder output from all 47 species
LOC_Os02g38950.1 LOC_Os02g38950 Pentatricopeptide repeat-containing protein At3g04130,... 0.02 OrthoFinder output from all 47 species
LOC_Os03g51840.1 LOC_Os03g51840 Pentatricopeptide repeat-containing protein At3g49730... 0.03 OrthoFinder output from all 47 species
Len_g19159 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06036 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_8206159g0010 No alias Pentatricopeptide repeat-containing protein At5g15010,... 0.02 OrthoFinder output from all 47 species
MA_845827g0010 No alias Pentatricopeptide repeat-containing protein At1g06710,... 0.03 OrthoFinder output from all 47 species
Msp_g08820 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g14416 PPR40 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g14954 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g17038 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc04g081950.4.1 Solyc04g081950 Pentatricopeptide repeat-containing protein At1g20300,... 0.03 OrthoFinder output from all 47 species
Solyc11g070040.3.1 Solyc11g070040 Pentatricopeptide repeat-containing protein At1g77360,... 0.03 OrthoFinder output from all 47 species
Spa_g11258 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g47474 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e005446_P003 Zm00001e005446 group-II intron mitochondrial splicing factor (MISF68) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 189 236
IPR002885 Pentatricopeptide_repeat 464 511
IPR002885 Pentatricopeptide_repeat 297 342
IPR002885 Pentatricopeptide_repeat 264 290
IPR002885 Pentatricopeptide_repeat 108 164
IPR002885 Pentatricopeptide_repeat 426 452
IPR002885 Pentatricopeptide_repeat 360 390
No external refs found!