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  5. Ceric.09G007700.1

Ceric.09G007700.1 (WLIM1, Ceric.09G007700)


Aliases : WLIM1, Ceric.09G007700

Description : LIM-type transcription factor & original description: pacid=50587725 polypeptide=Ceric.09G007700.1.p locus=Ceric.09G007700 ID=Ceric.09G007700.1.v2.1 annot-version=v2.1


Gene families : OG0000440 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000440_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.09G007700.1
Cluster HCCA: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
Adi_g077331 WLIM1 LIM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g32263 WLIM1 LIM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g12127 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g04896 No alias LIM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g39812 No alias LIM-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g27988 WLIM1 LIM-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01007812001 WLIM1 RNA biosynthesis.transcriptional activation.LIM... 0.02 OrthoFinder output from all 47 species
LOC_Os02g42820.1 LOC_Os02g42820 transcription factor (LIM) 0.02 OrthoFinder output from all 47 species
LOC_Os04g45010.1 LOC_Os04g45010 transcription factor (LIM) 0.03 OrthoFinder output from all 47 species
Lfl_g05819 No alias LIM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g08756 WLIM1 LIM-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g25515 No alias LIM-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Solyc05g049870.3.1 Solyc05g049870 transcription factor (LIM) 0.07 OrthoFinder output from all 47 species
Zm00001e015234_P001 Zm00001e015234 transcription factor (LIM) 0.02 OrthoFinder output from all 47 species
Zm00001e018310_P001 WLIM1, Zm00001e018310 transcription factor (LIM) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0001671 ATPase activator activity IEP HCCA
MF GO:0003830 beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006487 protein N-linked glycosylation IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0008375 acetylglucosaminyltransferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
MF GO:0051087 chaperone binding IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
InterPro domains Description Start Stop
IPR001781 Znf_LIM 111 165
IPR001781 Znf_LIM 10 64
No external refs found!