Ceric.08G062900.1 (Ceric.08G062900)


Aliases : Ceric.08G062900

Description : mitochondrial RNA splicing factor *(ABO5) & original description: pacid=50638975 polypeptide=Ceric.08G062900.1.p locus=Ceric.08G062900 ID=Ceric.08G062900.1.v2.1 annot-version=v2.1


Gene families : OG0005617 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005617_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.08G062900.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00061p00191420 ABO5,... RNA processing.organelle machineries.RNA... 0.04 OrthoFinder output from all 47 species
Als_g56987 No alias mitochondrial RNA splicing factor *(ABO5) & original... 0.05 OrthoFinder output from all 47 species
Aop_g09293 No alias mitochondrial RNA splicing factor *(ABO5) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene24227.t1 Aspi01Gene24227 mitochondrial RNA splicing factor *(ABO5) & original... 0.03 OrthoFinder output from all 47 species
Dac_g45786 No alias mitochondrial RNA splicing factor *(ABO5) & original... 0.06 OrthoFinder output from all 47 species
Dcu_g11869 No alias mitochondrial RNA splicing factor *(ABO5) & original... 0.09 OrthoFinder output from all 47 species
Dde_g24980 No alias mitochondrial RNA splicing factor *(ABO5) & original... 0.05 OrthoFinder output from all 47 species
Ehy_g12116 No alias mitochondrial RNA splicing factor *(ABO5) & original... 0.04 OrthoFinder output from all 47 species
LOC_Os02g13340.1 ABO5, LOC_Os02g13340 ABO5 mitochondrial RNA splicing factor 0.04 OrthoFinder output from all 47 species
MA_10433402g0010 ABO5 ABO5 mitochondrial RNA splicing factor 0.03 OrthoFinder output from all 47 species
MA_90107g0010 No alias Pentatricopeptide repeat-containing protein At1g05600... 0.03 OrthoFinder output from all 47 species
Nbi_g07928 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g14452 No alias mitochondrial RNA splicing factor *(ABO5) & original... 0.03 OrthoFinder output from all 47 species
Ppi_g49410 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0112.g020774 No alias mitochondrial RNA splicing factor *(ABO5) & original... 0.06 OrthoFinder output from all 47 species
Tin_g10630 No alias mitochondrial RNA splicing factor *(ABO5) & original... 0.03 OrthoFinder output from all 47 species
Tin_g26992 No alias mitochondrial RNA splicing factor *(ABO5) & original... 0.06 OrthoFinder output from all 47 species
Zm00001e024924_P002 ABO5, Zm00001e024924 ABO5 mitochondrial RNA splicing factor 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 603 631
IPR002885 Pentatricopeptide_repeat 411 470
IPR002885 Pentatricopeptide_repeat 704 752
IPR002885 Pentatricopeptide_repeat 356 402
IPR002885 Pentatricopeptide_repeat 634 683
No external refs found!