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  5. Ceric.08G019700.1

Ceric.08G019700.1 (Ceric.08G019700)


Aliases : Ceric.08G019700

Description : tyrosyl-DNA phosphodiesterase *(TDP2) & original description: pacid=50638736 polypeptide=Ceric.08G019700.1.p locus=Ceric.08G019700 ID=Ceric.08G019700.1.v2.1 annot-version=v2.1


Gene families : OG0003651 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003651_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.08G019700.1

Target Alias Description ECC score Gene Family Method Actions
Als_g59916 No alias tyrosyl-DNA phosphodiesterase *(TDP2) & original... 0.04 OrthoFinder output from all 47 species
Dde_g11717 No alias tyrosyl-DNA phosphodiesterase *(TDP2) & original... 0.03 OrthoFinder output from all 47 species
Len_g12218 No alias tyrosyl-DNA phosphodiesterase *(TDP2) & original... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR005135 Endo/exonuclease/phosphatase 422 633
IPR001876 Znf_RanBP2 195 216
No external refs found!