Cpa|evm.model.tig00021537.23


Description : 29.1.3 protein.aa activation.threonine-tRNA ligase Encodes a dual-targeted threonyl-tRNA synthetase found in both the chloroplast and mitochondrion. Threonyl-tRNA synthetase


Gene families : OG_01_0003171 (Gene family) Phylogenetic Tree(s): OG0003171_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Cpa|evm.model.tig00021537.23
Cluster HCCA cluster: Cluster_110

Target Alias Description ECC score Gene Family Method Actions
Cre06.g273300 No alias 29.1.3 protein.aa activation.threonine-tRNA ligase... 0.02 Gene family
GSVIVT01014680001 No alias 29.1.3 protein.aa activation.threonine-tRNA ligase... 0.03 Gene family
Smo130418 PACid_15421699 No description available 0.01 Gene family
Zm00001d013607 GRMZM2G553314 29.1.3 protein.aa activation.threonine-tRNA ligase... 0.01 Gene family
Zm00001d032667 No alias 29.1.3 protein.aa activation.threonine-tRNA ligase... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA InterProScan
MF GO:0004812 aminoacyl-tRNA ligase activity IEA InterProScan
MF GO:0005524 ATP binding IEA InterProScan
BP GO:0006418 tRNA aminoacylation for protein translation IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR004154 Anticodon-bd 600 672
IPR012947 tRNA_SAD 232 281
IPR004095 TGS 64 124
IPR002314 aa-tRNA-synt_IIb 385 455
No external refs found!