Solyc06g084210.3.1 (Solyc06g084210.3)


Aliases : Solyc06g084210.3

Description : 29.3.4.2 protein.targeting.secretory pathway.golgi homologous to yeast and animal Sec24 proteins expression in yeast cells enhances their survival under oxidative stress conditions. clone eighty-four (CEF)


Gene families : OG_01_0002022 (Gene family) Phylogenetic Tree(s): OG0002022_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc06g084210.3.1
Cluster HCCA cluster: Cluster_137

Target Alias Description ECC score Gene Family Method Actions
AT3G07100 ERMO2, SEC24A Sec23/Sec24 protein transport family protein 0.07 Gene family
AT3G44340 CEF clone eighty-four 0.15 Gene family
AT4G32640 No alias Sec23/Sec24 protein transport family protein 0.07 Gene family
Cpa|evm.model.tig00000829.3 No alias 29.3.4.2 protein.targeting.secretory pathway.golgi... 0.03 Gene family
Cre01.g035850 No alias 29.3.4.2 protein.targeting.secretory pathway.golgi... 0.08 Gene family
Cre02.g091150 No alias 29.3.4.2 protein.targeting.secretory pathway.golgi... 0.05 Gene family
GSVIVT01014261001 No alias No description available 0.11 Gene family
GSVIVT01014611001 No alias 31.4 cell.vesicle transport Sec23/Sec24 protein... 0.1 Gene family
LOC_Os04g04020 Os04g0129500 No description available 0.12 Gene family
LOC_Os11g29200 Os11g0482100 29.3.4.2 protein.targeting.secretory pathway.golgi... 0.02 Gene family
MA_10430919g0010 No alias No description available 0.06 Gene family
MA_45050g0010 No alias 31.4 cell.vesicle transport Sec23/Sec24 protein... 0.03 Gene family
Smo140536 PACid_15407376 No description available 0.08 Gene family
Smo157789 PACid_15414599 No description available 0.05 Gene family
Zm00001d004466 GRMZM2G081745 No description available 0.11 Gene family
Zm00001d004667 GRMZM2G075680 29.3.4.2 protein.targeting.secretory pathway.golgi... 0.13 Gene family
Zm00001d049208 GRMZM2G019236 29.3.4.2 protein.targeting.secretory pathway.golgi... 0.16 Gene family

Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEA InterProScan
BP GO:0006888 ER to Golgi vesicle-mediated transport IEA InterProScan
CC GO:0030127 COPII vesicle coat IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR006895 Znf_Sec23_Sec24 404 442
IPR012990 Sec23_24_beta_S 724 807
IPR006900 Sec23/24_helical_dom 819 913
IPR006896 Sec23/24_trunk_dom 479 719
IPR007123 Gelsolin-like_dom 940 1009
No external refs found!