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  5. Ceric.07G096700.1

Ceric.07G096700.1 (BRCA2(V), BRCA2B,...)


Aliases : BRCA2(V), BRCA2B, ATBRCA2(V), Ceric.07G096700

Description : component *(BRCA2) of regulatory BRCC deubiquination complex & original description: pacid=50626623 polypeptide=Ceric.07G096700.1.p locus=Ceric.07G096700 ID=Ceric.07G096700.1.v2.1 annot-version=v2.1


Gene families : OG0007523 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007523_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.07G096700.1

Target Alias Description ECC score Gene Family Method Actions
AT5G01630 BRCA2(V),... BRCA2-like B 0.04 OrthoFinder output from all 47 species
Azfi_s0238.g059627 BRCA2(V),... component *(BRCA2) of regulatory BRCC deubiquination... 0.03 OrthoFinder output from all 47 species
MA_10430364g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_91494g0010 BRCA2(V),... DMC1-recombinase recruitment protein (BRCA2) 0.05 OrthoFinder output from all 47 species
Mp6g19670.1 BRCA2(V),... DMC1-recombinase recruitment protein (BRCA2). component... 0.03 OrthoFinder output from all 47 species
Solyc02g050200.2.1 BRCA2(V),... DMC1-recombinase recruitment protein (BRCA2). component... 0.04 OrthoFinder output from all 47 species
Solyc02g050210.2.1 BRCA2(V),... DMC1-recombinase recruitment protein (BRCA2). component... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0000724 double-strand break repair via homologous recombination IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003678 DNA helicase activity IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0043138 3'-5' DNA helicase activity IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR015252 BRCA2_hlx 732 802
IPR002093 BRCA2_repeat 281 304
IPR002093 BRCA2_repeat 200 223
IPR002093 BRCA2_repeat 501 525
IPR015187 BRCA2_OB_1 807 934
No external refs found!