Aliases : RPOC1, Ceric.07G092700
Description : not classified & original description: pacid=50627572 polypeptide=Ceric.07G092700.1.p locus=Ceric.07G092700 ID=Ceric.07G092700.1.v2.1 annot-version=v2.1
Gene families : OG0006500 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006500_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
ATCG00180 | RPOC1 | DNA-directed RNA polymerase family protein | 0.06 | OrthoFinder output from all 47 species | |
Aev_g25869 | RPOC1 | core component *(RpoC1) of plastid-encoded RNA... | 0.08 | OrthoFinder output from all 47 species | |
Cba_g01180 | RPOC1 | core component *(RpoC1) of plastid-encoded RNA... | 0.05 | OrthoFinder output from all 47 species | |
Ceric.29G004700.1 | RPOC1, Ceric.29G004700 | not classified & original description: pacid=50625659... | 0.04 | OrthoFinder output from all 47 species | |
Dde_g17519 | RPOC1 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Len_g58564 | RPOC1 | core component *(RpoC1) of plastid-encoded RNA... | 0.03 | OrthoFinder output from all 47 species | |
Nbi_g14005 | RPOC1 | core component *(RpoC1) of plastid-encoded RNA... | 0.05 | OrthoFinder output from all 47 species | |
Ore_g26219 | RPOC1 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Pir_g09480 | RPOC1 | core component *(RpoC1) of plastid-encoded RNA... | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0533.g027469 | No alias | not classified & original description: CDS=1-663 | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0533.g027470 | RPOC1 | not classified & original description: CDS=1-777 | 0.03 | OrthoFinder output from all 47 species | |
Solyc01g017370.2.1 | RPOC1, Solyc01g017370 | DNA-directed RNA polymerase subunit beta OS=Nicotiana... | 0.03 | OrthoFinder output from all 47 species | |
Solyc12g062580.1.1 | RPOC1, Solyc12g062580 | DNA-directed RNA polymerase subunit beta OS=Solanum... | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | Interproscan |
MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEA | Interproscan |
BP | GO:0006351 | DNA-templated transcription | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
MF | GO:0005198 | structural molecule activity | IEP | HCCA |
CC | GO:0005840 | ribosome | IEP | HCCA |
BP | GO:0006412 | translation | IEP | HCCA |
BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
BP | GO:0043603 | amide metabolic process | IEP | HCCA |
BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR007080 | RNA_pol_Rpb1_1 | 7 | 133 |
No external refs found! |