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  5. Ceric.07G088000.1

Ceric.07G088000.1 (Ceric.07G088000)


Aliases : Ceric.07G088000

Description : E3 ubiquitin ligase *(CHY) & original description: pacid=50626671 polypeptide=Ceric.07G088000.1.p locus=Ceric.07G088000 ID=Ceric.07G088000.1.v2.1 annot-version=v2.1


Gene families : OG0002193 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002193_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.07G088000.1
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
Cre17.g718300 No alias E3 ubiquitin-protein ligase MIEL1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Ppi_g00866 No alias E3 ubiquitin ligase *(CHY) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e019943_P001 Zm00001e019943 Probable E3 ubiquitin-protein ligase RZFP34 OS=Oryza... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
InterPro domains Description Start Stop
IPR008913 Znf_CHY 42 122
IPR018957 Znf_C3HC4_RING-type 177 219
IPR039512 RCHY1_zinc-ribbon 224 282
No external refs found!