Ceric.07G070900.1 (Ceric.07G070900)


Aliases : Ceric.07G070900

Description : not classified & original description: pacid=50626059 polypeptide=Ceric.07G070900.1.p locus=Ceric.07G070900 ID=Ceric.07G070900.1.v2.1 annot-version=v2.1


Gene families : OG0002960 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002960_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.07G070900.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00065p00122030 evm_27.TU.AmTr_v1... Ubiquitin carboxyl-terminal hydrolase 12 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
AT2G25320 No alias TRAF-like family protein 0.05 OrthoFinder output from all 47 species
Adi_g098468 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g107387 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g01607 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g05545 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g35642 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Als_g18860 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g18903 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aob_g16408 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g12067 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Dde_g15571 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01035878001 No alias Ubiquitin carboxyl-terminal hydrolase 13 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
Len_g54194 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05749 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g12534 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10430470g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_10434824g0010 No alias Ubiquitin carboxyl-terminal hydrolase 12 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_9624g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Mp8g09710.1 No alias MATH domain and coiled-coil domain-containing protein... 0.02 OrthoFinder output from all 47 species
Msp_g47722 No alias component *(LUG/LUH) of transcriptional co-repressor... 0.03 OrthoFinder output from all 47 species
Ore_g29897 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pnu_g22486 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g29810 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g15178 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo173767 No alias Ubiquitin carboxyl-terminal hydrolase 12 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
Solyc06g017970.4.1 Solyc06g017970 Ubiquitin carboxyl-terminal hydrolase 13 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
Spa_g28008 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Zm00001e022965_P001 Zm00001e022965 Ubiquitin carboxyl-terminal hydrolase 13 OS=Arabidopsis... 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0000350 generation of catalytic spliceosome for second transesterification step IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0003917 DNA topoisomerase type I (single strand cut, ATP-independent) activity IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0022618 ribonucleoprotein complex assembly IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0071826 ribonucleoprotein complex subunit organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
InterPro domains Description Start Stop
IPR002083 MATH/TRAF_dom 103 225
IPR002083 MATH/TRAF_dom 447 554
IPR002083 MATH/TRAF_dom 598 709
No external refs found!