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  5. Ceric.07G061700.1

Ceric.07G061700.1 (Ceric.07G061700)


Aliases : Ceric.07G061700

Description : not classified & original description: pacid=50626878 polypeptide=Ceric.07G061700.1.p locus=Ceric.07G061700 ID=Ceric.07G061700.1.v2.1 annot-version=v2.1


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.07G061700.1
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00046p00214930 CRR22,... Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species
AMTR_s00077p00191560 OTP82,... Pentatricopeptide repeat-containing protein DOT4,... 0.03 OrthoFinder output from all 47 species
AMTR_s00111p00107400 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g21065... 0.03 OrthoFinder output from all 47 species
Aev_g38989 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g15073 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g32056 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g09402 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g28608 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G006200.1 Ceric.01G006200 not classified & original description: pacid=50592341... 0.04 OrthoFinder output from all 47 species
Ceric.05G080500.1 Ceric.05G080500 not classified & original description: pacid=50577586... 0.05 OrthoFinder output from all 47 species
Ceric.18G083800.1 Ceric.18G083800 not classified & original description: pacid=50622461... 0.05 OrthoFinder output from all 47 species
Ceric.27G059300.1 OTP84, Ceric.27G059300 not classified & original description: pacid=50605156... 0.06 OrthoFinder output from all 47 species
Ceric.29G050000.1 Ceric.29G050000 ssDNA-binding protein *(OSB) & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.32G057100.1 Ceric.32G057100 not classified & original description: pacid=50598475... 0.03 OrthoFinder output from all 47 species
Ceric.35G035600.1 Ceric.35G035600 not classified & original description: pacid=50580802... 0.06 OrthoFinder output from all 47 species
Ceric.37G022300.1 CRR22, Ceric.37G022300 not classified & original description: pacid=50616680... 0.08 OrthoFinder output from all 47 species
Dcu_g21452 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g38441 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os05g37225.1 LOC_Os05g37225 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Nbi_g04976 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g10800 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0007.g003527 EMB2758 not classified & original description: CDS=1-1284 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0015.g006421 No alias not classified & original description: CDS=1-675 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0023.g008810 No alias not classified & original description: CDS=1-1683 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0153.g023499 No alias not classified & original description: CDS=1-1593 0.05 OrthoFinder output from all 47 species
Sam_g10477 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g14912 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 356 378
IPR002885 Pentatricopeptide_repeat 152 175
IPR002885 Pentatricopeptide_repeat 75 123
IPR002885 Pentatricopeptide_repeat 177 224
IPR002885 Pentatricopeptide_repeat 279 327
IPR002885 Pentatricopeptide_repeat 382 428
No external refs found!