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  5. Ceric.07G043800.1

Ceric.07G043800.1 (Ceric.07G043800)


Aliases : Ceric.07G043800

Description : REM-type transcription factor & original description: pacid=50626262 polypeptide=Ceric.07G043800.1.p locus=Ceric.07G043800 ID=Ceric.07G043800.1.v2.1 annot-version=v2.1


Gene families : OG0000663 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000663_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.07G043800.1
Cluster HCCA: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00078p00115450 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.B3... 0.04 OrthoFinder output from all 47 species
AT5G42700 No alias AP2/B3-like transcriptional factor family protein 0.12 OrthoFinder output from all 47 species
AT5G58280 No alias AP2/B3-like transcriptional factor family protein 0.08 OrthoFinder output from all 47 species
Ala_g28493 No alias REM-type transcription factor & original description: none 0.08 OrthoFinder output from all 47 species
Als_g15351 No alias REM-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Als_g51859 No alias REM-type transcription factor & original description: none 0.12 OrthoFinder output from all 47 species
Aop_g06897 No alias REM-type transcription factor & original description: none 0.1 OrthoFinder output from all 47 species
Aop_g25439 No alias REM-type transcription factor & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g36068 No alias REM-type transcription factor & original description: none 0.12 OrthoFinder output from all 47 species
Aspi01Gene04981.t1 Aspi01Gene04981 REM-type transcription factor & original description: none 0.09 OrthoFinder output from all 47 species
Aspi01Gene24779.t1 Aspi01Gene24779 REM-type transcription factor & original description: none 0.09 OrthoFinder output from all 47 species
Aspi01Gene24780.t1 Aspi01Gene24780 REM-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene54333.t1 Aspi01Gene54333 REM-type transcription factor & original description: none 0.08 OrthoFinder output from all 47 species
Aspi01Gene61918.t1 Aspi01Gene61918 REM-type transcription factor & original description: none 0.11 OrthoFinder output from all 47 species
Dcu_g18248 No alias REM-type transcription factor & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g41437 No alias REM-type transcription factor & original description: none 0.19 OrthoFinder output from all 47 species
Dcu_g43688 No alias REM-type transcription factor & original description: none 0.1 OrthoFinder output from all 47 species
GSVIVT01009519001 No alias RNA biosynthesis.transcriptional activation.B3... 0.03 OrthoFinder output from all 47 species
GSVIVT01024536001 No alias RNA biosynthesis.transcriptional activation.B3... 0.01 OrthoFinder output from all 47 species
GSVIVT01031761001 No alias RNA biosynthesis.transcriptional activation.B3... 0.03 OrthoFinder output from all 47 species
Gb_35990 No alias transcription factor (REM) 0.11 OrthoFinder output from all 47 species
LOC_Os03g08620.1 LOC_Os03g08620 transcription factor (REM) 0.07 OrthoFinder output from all 47 species
Len_g01795 No alias REM-type transcription factor & original description: none 0.09 OrthoFinder output from all 47 species
Len_g55690 No alias REM-type transcription factor & original description: none 0.07 OrthoFinder output from all 47 species
Len_g56640 No alias REM-type transcription factor & original description: none 0.08 OrthoFinder output from all 47 species
Lfl_g28691 No alias REM-type transcription factor & original description: none 0.12 OrthoFinder output from all 47 species
Lfl_g29370 No alias REM-type transcription factor & original description: none 0.1 OrthoFinder output from all 47 species
Mp2g08790.1 No alias transcription factor (REM) 0.11 OrthoFinder output from all 47 species
Msp_g36795 No alias REM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g08674 No alias REM-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g34487 No alias REM-type transcription factor & original description: none 0.13 OrthoFinder output from all 47 species
Nbi_g39771 No alias REM-type transcription factor & original description: none 0.2 OrthoFinder output from all 47 species
Ore_g28568 No alias REM-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pp3c2_5990V3.1 Pp3c2_5990 AP2/B3-like transcriptional factor family protein 0.01 OrthoFinder output from all 47 species
Ppi_g01929 No alias REM-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g11582 No alias REM-type transcription factor & original description: none 0.08 OrthoFinder output from all 47 species
Ppi_g11583 No alias REM-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0010.g004736 No alias REM-type transcription factor & original description: CDS=35-988 0.09 OrthoFinder output from all 47 species
Sacu_v1.1_s0085.g018379 No alias REM-type transcription factor & original description:... 0.05 OrthoFinder output from all 47 species
Sam_g48173 No alias REM-type transcription factor & original description: none 0.07 OrthoFinder output from all 47 species
Smo424732 No alias RNA biosynthesis.transcriptional activation.B3... 0.04 OrthoFinder output from all 47 species
Solyc01g108140.4.1 Solyc01g108140 transcription factor (REM) 0.04 OrthoFinder output from all 47 species
Solyc04g079130.2.1 Solyc04g079130 transcription factor (REM) 0.05 OrthoFinder output from all 47 species
Solyc06g034140.3.1 Solyc06g034140 transcription factor (REM) 0.03 OrthoFinder output from all 47 species
Spa_g03459 No alias REM-type transcription factor & original description: none 0.16 OrthoFinder output from all 47 species
Spa_g49592 No alias REM-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g56976 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g00720 No alias REM-type transcription factor & original description: none 0.11 OrthoFinder output from all 47 species
Tin_g11017 No alias REM-type transcription factor & original description: none 0.11 OrthoFinder output from all 47 species
Tin_g29854 No alias REM-type transcription factor & original description: none 0.17 OrthoFinder output from all 47 species
Tin_g32723 No alias REM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e000624_P003 Zm00001e000624 transcription factor (REM) 0.06 OrthoFinder output from all 47 species
Zm00001e040028_P004 Zm00001e040028 transcription factor (REM) 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
CC GO:0030684 preribosome IEP HCCA
CC GO:0030688 preribosome, small subunit precursor IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR003340 B3_DNA-bd 126 216
No external refs found!