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  5. Solyc06g083420.2.1

Solyc06g083420.2.1 (Solyc06g083420.2)


Aliases : Solyc06g083420.2

Description : 27.3.67 RNA.regulation of transcription.putative transcription regulator Helicase/SANT-associated, DNA binding protein


Gene families : OG_01_0002474 (Gene family) Phylogenetic Tree(s): OG0002474_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc06g083420.2.1
Cluster HCCA cluster: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
AT3G24870 No alias Helicase/SANT-associated, DNA binding protein 0.02 Gene family
AT3G24880 No alias Helicase/SANT-associated, DNA binding protein 0.2 Gene family
GSVIVT01028685001 No alias 35.2 not assigned.unknown Helicase/SANT-associated, DNA... 0.21 Gene family
LOC_Os05g51550 Os05g0593300 27.3.67 RNA.regulation of transcription.putative... 0.05 Gene family
LOC_Os08g08000 Os08g0177300 27.3.67 RNA.regulation of transcription.putative... 0.05 Gene family
MA_10433449g0010 No alias No description available 0.02 Gene family
MA_16444g0030 No alias 35.2 not assigned.unknown Helicase/SANT-associated, DNA... 0.08 Gene family
MA_31176g0010 No alias 35.2 not assigned.unknown Helicase/SANT-associated, DNA... 0.11 Gene family
Smo424802 PACid_15405149 27.3.67 RNA.regulation of transcription.putative... 0.04 Gene family
Zm00001d009750 GRMZM2G018048,... 27.3.67 RNA.regulation of transcription.putative... 0.17 Gene family
Zm00001d009751 GRMZM2G018142 35.2 not assigned.unknown Helicase/SANT-associated, DNA... 0.19 Gene family
Zm00001d044281 GRMZM2G440943,... 27.3.67 RNA.regulation of transcription.putative... 0.18 Gene family
Zm00001d044283 GRMZM2G349570,... 27.3.67 RNA.regulation of transcription.putative... 0.14 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR014012 HSA_dom 594 628
No external refs found!