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  4. SequenceOrthoFinder output from all 47 species
  5. Ceric.06G090100.1

Ceric.06G090100.1 (SK21, ASK21, Ceric.06G090100)


Aliases : SK21, ASK21, Ceric.06G090100

Description : ASK-type linker component of SCF E3 ubiquitin ligase complexes & original description: pacid=50620047 polypeptide=Ceric.06G090100.1.p locus=Ceric.06G090100 ID=Ceric.06G090100.1.v2.1 annot-version=v2.1


Gene families : OG0005505 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005505_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.06G090100.1
Cluster HCCA: Cluster_81

Target Alias Description ECC score Gene Family Method Actions
Als_g12590 SK21, ASK21 ASK-type linker component of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Aob_g06627 SK21, ASK21 ASK-type linker component of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Aop_g20096 SK21, ASK21 ASK-type linker component of SCF E3 ubiquitin ligase... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000197.16 SK20, ASK20 Protein degradation.peptide tagging.Ubiquitin... 0.01 OrthoFinder output from all 47 species
Dcu_g04680 SK21, ASK21 ASK-type linker component of SCF E3 ubiquitin ligase... 0.07 OrthoFinder output from all 47 species
LOC_Os03g01660.1 SK21, ASK21,... target protein binding component SKP1/ASK1 of... 0.02 OrthoFinder output from all 47 species
Pir_g18586 SK21, ASK21 ASK-type linker component of SCF E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
Sam_g28631 No alias ASK-type linker component of SCF E3 ubiquitin ligase... 0.05 OrthoFinder output from all 47 species
Smo115864 SK21, ASK21 Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
Zm00001e021584_P008 SK21, ASK21,... target protein binding component SKP1/ASK1 of... 0.04 OrthoFinder output from all 47 species
Zm00001e040021_P001 SK21, ASK21,... target protein binding component SKP1/ASK1 of... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006511 ubiquitin-dependent protein catabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
CC GO:0030684 preribosome IEP HCCA
CC GO:0032040 small-subunit processome IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR016072 Skp1_comp_dimer 112 149
No external refs found!