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  5. Ceric.05G068200.1

Ceric.05G068200.1 (emb1629, APO2, Ceric.05G068200)


Aliases : emb1629, APO2, Ceric.05G068200

Description : organelle RNA splicing factor *(APO) & original description: pacid=50578098 polypeptide=Ceric.05G068200.1.p locus=Ceric.05G068200 ID=Ceric.05G068200.1.v2.1 annot-version=v2.1


Gene families : OG0001840 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001840_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.05G068200.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g022368 emb1629, APO2 organelle RNA splicing factor *(APO) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g41978 emb1629, APO2 organelle RNA splicing factor *(APO) & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g17568 APO1 organelle RNA splicing factor *(APO) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g24422 emb1629, APO2 organelle RNA splicing factor *(APO) & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os02g50010.1 emb1629, APO2,... APO protein 2, chloroplastic OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os04g52520.4 APO1, LOC_Os04g52520 APO protein 1, chloroplastic OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_931234g0010 APO1 APO protein 1, chloroplastic OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Msp_g11045 APO1 organelle RNA splicing factor *(APO) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g08363 APO1 organelle RNA splicing factor *(APO) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g00939 emb1629, APO2 organelle RNA splicing factor *(APO) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g24352 APO1 organelle RNA splicing factor *(APO) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g24427 emb1629, APO2 organelle RNA splicing factor *(APO) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e023481_P001 emb1629, APO2,... APO protein 2, chloroplastic OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0031072 heat shock protein binding IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
InterPro domains Description Start Stop
IPR023342 APO_dom 383 499
IPR023342 APO_dom 96 284
No external refs found!