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  5. Ceric.05G062500.1

Ceric.05G062500.1 (Ceric.05G062500)


Aliases : Ceric.05G062500

Description : substrate adaptor *(PRP17) of CUL4-based E3 ubiquitin ligase complex & original description: pacid=50577680 polypeptide=Ceric.05G062500.1.p locus=Ceric.05G062500 ID=Ceric.05G062500.1.v2.1 annot-version=v2.1


Gene families : OG0006597 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006597_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.05G062500.1
Cluster HCCA: Cluster_121

Target Alias Description ECC score Gene Family Method Actions
Cba_g03265 No alias substrate adaptor *(PRP17) of CUL4-based E3 ubiquitin... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000663.19 No alias No description available 0.01 OrthoFinder output from all 47 species
Dac_g06482 No alias substrate adaptor *(PRP17) of CUL4-based E3 ubiquitin... 0.03 OrthoFinder output from all 47 species
GSVIVT01020240001 No alias RNA processing.RNA splicing.spliceosome-associated... 0.06 OrthoFinder output from all 47 species
Lfl_g16015 No alias substrate adaptor *(PRP17) of CUL4-based E3 ubiquitin... 0.03 OrthoFinder output from all 47 species
Pir_g04813 No alias substrate adaptor *(PRP17) of CUL4-based E3 ubiquitin... 0.03 OrthoFinder output from all 47 species
Ppi_g04570 No alias substrate adaptor *(PRP17) of CUL4-based E3 ubiquitin... 0.02 OrthoFinder output from all 47 species
Smo78344 No alias RNA processing.RNA splicing.spliceosome-associated... 0.04 OrthoFinder output from all 47 species
Solyc02g078970.4.1 Solyc02g078970 component Prp17 of non-snRNP MOS4-associated complex 0.03 OrthoFinder output from all 47 species
Tin_g01996 No alias substrate adaptor *(PRP17) of CUL4-based E3 ubiquiTin... 0.07 OrthoFinder output from all 47 species
Zm00001e001921_P002 Zm00001e001921 component Prp17 of non-snRNP MOS4-associated complex 0.04 OrthoFinder output from all 47 species
Zm00001e038006_P002 Zm00001e038006 component Prp17 of non-snRNP MOS4-associated complex 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0031625 ubiquitin protein ligase binding IEP HCCA
MF GO:0035596 methylthiotransferase activity IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
MF GO:0044389 ubiquitin-like protein ligase binding IEP HCCA
MF GO:0050497 alkylthioltransferase activity IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 549 585
IPR001680 WD40_repeat 287 323
IPR001680 WD40_repeat 507 542
IPR001680 WD40_repeat 328 366
IPR001680 WD40_repeat 415 451
No external refs found!