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  5. Ceric.05G059600.1

Ceric.05G059600.1 (SYT5, NTMC2T2.1,...)


Aliases : SYT5, NTMC2T2.1, SYTE, NTMC2TYPE2.1, ATSYTE, Ceric.05G059600

Description : not classified & original description: pacid=50577361 polypeptide=Ceric.05G059600.1.p locus=Ceric.05G059600 ID=Ceric.05G059600.1.v2.1 annot-version=v2.1


Gene families : OG0000213 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000213_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.05G059600.1
Cluster HCCA: Cluster_52

Target Alias Description ECC score Gene Family Method Actions
Adi_g088411 NTMC2TYPE4, NTMC2T4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g07616 SYT5, NTMC2T2.1,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g24753 NTMC2T1.2, SYTB,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020557.18 SYT5, NTMC2T2.1,... No description available 0.01 OrthoFinder output from all 47 species
GSVIVT01035883001 SYT5, NTMC2T2.1,... Synaptotagmin-5 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Mp1g09920.1 NTMC2T1.2, SYTB,... endoplasmic reticulum-plasma membrane tethering protein... 0.02 OrthoFinder output from all 47 species
Pnu_g09751 NTMC2TYPE4, NTMC2T4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0110.g020642 SYT5, NTMC2T2.1,... not classified & original description: CDS=317-1894 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
InterPro domains Description Start Stop
IPR000008 C2_dom 299 403
IPR039010 Synaptotagmin_SMP 105 285
No external refs found!