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  5. Ceric.05G049400.1

Ceric.05G049400.1 (RPS11, Ceric.05G049400)


Aliases : RPS11, Ceric.05G049400

Description : component *(uS11c) of small plastid ribosomal-subunit proteome & original description: pacid=50578175 polypeptide=Ceric.05G049400.1.p locus=Ceric.05G049400 ID=Ceric.05G049400.1.v2.1 annot-version=v2.1


Gene families : OG0004584 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004584_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.05G049400.1

Target Alias Description ECC score Gene Family Method Actions
ATCG00750 RPS11 ribosomal protein S11 0.11 OrthoFinder output from all 47 species
Aev_g01915 RPS11 component *(uS11m) of small mitoribosomal-subunit... 0.11 OrthoFinder output from all 47 species
Aev_g37240 RPS11 component *(uS11c) of small plastid ribosomal-subunit... 0.15 OrthoFinder output from all 47 species
Ala_g07144 RPS11 component *(uS11m) of small mitoribosomal-subunit... 0.07 OrthoFinder output from all 47 species
Als_g62775 RPS11 not classified & original description: none 0.1 OrthoFinder output from all 47 species
Azfi_s0027.g023689 No alias not classified & original description: CDS=1-321 0.05 OrthoFinder output from all 47 species
Cba_g15340 RPS11 component *(uS11m) of small mitoribosomal-subunit... 0.06 OrthoFinder output from all 47 species
Ceric.1Z122600.1 RPS11, Ceric.1Z122600 not classified & original description: pacid=50617110... 0.09 OrthoFinder output from all 47 species
Ceric.1Z196300.1 RPS11, Ceric.1Z196300 not classified & original description: pacid=50586509... 0.09 OrthoFinder output from all 47 species
Ceric.1Z237100.1 RPS11, Ceric.1Z237100 not classified & original description: pacid=50569351... 0.09 OrthoFinder output from all 47 species
Cre06.g288400 RPS11 30S ribosomal protein S11, chloroplastic OS=Chlorella vulgaris 0.02 OrthoFinder output from all 47 species
LOC_Os04g16838.1 RPS11, LOC_Os04g16838 component psRPS11 of small ribosomal subunit proteome 0.18 OrthoFinder output from all 47 species
LOC_Os10g21332.1 RPS11, LOC_Os10g21332 component psRPS11 of small ribosomal subunit proteome 0.18 OrthoFinder output from all 47 species
Mp4g09870.1 No alias Ribosomal protein S11, mitochondrial OS=Marchantia... 0.07 OrthoFinder output from all 47 species
Mpzg00730.1 No alias component psRPS11 of small ribosomal subunit proteome 0.07 OrthoFinder output from all 47 species
Nbi_g20255 RPS11 component *(uS11m) of small mitoribosomal-subunit... 0.09 OrthoFinder output from all 47 species
Pir_g07424 RPS11 not classified & original description: none 0.2 OrthoFinder output from all 47 species
Pp3c14_21450V3.1 Pp3c14_21450 ribosomal protein S11 0.01 OrthoFinder output from all 47 species
Smo137780 RPS11 Protein biosynthesis.organelle translation... 0.03 OrthoFinder output from all 47 species
Solyc00g500030.1.1 RPS11, Solyc00g500030 component psRPS11 of small ribosomal subunit proteome 0.1 OrthoFinder output from all 47 species
Solyc00g500075.1.1 RPS11, Solyc00g500075 component psRPS11 of small ribosomal subunit proteome 0.1 OrthoFinder output from all 47 species
Tin_g21094 RPS11 component *(uS11m) of small mitoribosomal-subunit... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA

No InterPro domains available for this sequence

No external refs found!