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  5. Ceric.05G044800.1

Ceric.05G044800.1 (PETD, Ceric.05G044800)


Aliases : PETD, Ceric.05G044800

Description : component *(PetD/IV) of cytochrome b6/f complex & original description: pacid=50578578 polypeptide=Ceric.05G044800.1.p locus=Ceric.05G044800 ID=Ceric.05G044800.1.v2.1 annot-version=v2.1


Gene families : OG0008554 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008554_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.05G044800.1
Cluster HCCA: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
ATCG00730 PETD photosynthetic electron transfer D 0.28 OrthoFinder output from all 47 species
Als_g01331 PETD component *(PetD/IV) of cytochrome b6/f complex &... 0.09 OrthoFinder output from all 47 species
Cba_g65705 PETD component *(PetD/IV) of cytochrome b6/f complex &... 0.09 OrthoFinder output from all 47 species
Ceric.05G041800.1 PETD, Ceric.05G041800 component *(PetD/IV) of cytochrome b6/f complex &... 0.12 OrthoFinder output from all 47 species
Ceric.05G051600.1 PETD, Ceric.05G051600 component *(PetD/IV) of cytochrome b6/f complex &... 0.07 OrthoFinder output from all 47 species
Ceric.13G017000.1 PETD, Ceric.13G017000 component *(PetD/IV) of cytochrome b6/f complex &... 0.05 OrthoFinder output from all 47 species
Ceric.32G035100.1 PETD, Ceric.32G035100 component *(PetD/IV) of cytochrome b6/f complex &... 0.04 OrthoFinder output from all 47 species
Ceric.38G008500.1 PETD, Ceric.38G008500 component *(PetD/IV) of cytochrome b6/f complex &... 0.12 OrthoFinder output from all 47 species
Dcu_g47307 PETD component *(PetD/IV) of cytochrome b6/f complex &... 0.14 OrthoFinder output from all 47 species
Gb_03953 No alias component PetD/IV of cytochrome b6/f complex 0.06 OrthoFinder output from all 47 species
LOC_Os01g57945.1 PETD, LOC_Os01g57945 component PetD/IV of cytochrome b6/f complex 0.35 OrthoFinder output from all 47 species
LOC_Os04g16844.1 PETD, LOC_Os04g16844 component PetD/IV of cytochrome b6/f complex 0.35 OrthoFinder output from all 47 species
LOC_Os08g15292.1 PETD, LOC_Os08g15292 component PetD/IV of cytochrome b6/f complex 0.1 OrthoFinder output from all 47 species
LOC_Os10g21326.1 PETD, LOC_Os10g21326 component PetD/IV of cytochrome b6/f complex 0.35 OrthoFinder output from all 47 species
Mp1g00750.1 No alias Cytochrome b6-f complex subunit 4 OS=Pinus thunbergii... 0.11 OrthoFinder output from all 47 species
Ore_g03954 PETD component *(PetD/IV) of cytochrome b6/f complex &... 0.18 OrthoFinder output from all 47 species
Pir_g65515 PETD component *(PetD/IV) of cytochrome b6/f complex &... 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002259 PETD not classified & original description: CDS=1-288 0.11 OrthoFinder output from all 47 species
Sam_g10280 No alias component *(PetD/IV) of cytochrome b6/f complex &... 0.1 OrthoFinder output from all 47 species
Solyc00g500028.1.1 PETD, Solyc00g500028 Cytochrome b6-f complex subunit 4 OS=Nymphaea alba... 0.27 OrthoFinder output from all 47 species
Solyc00g500073.1.1 PETB, Solyc00g500073 Cytochrome b6 OS=Helianthus annuus (sp|q1kxs9|cyb6_helan : 261.0) 0.29 OrthoFinder output from all 47 species
Solyc00g500158.1.1 PETD, Solyc00g500158 component PetD/IV of cytochrome b6/f complex 0.27 OrthoFinder output from all 47 species
Solyc01g017430.1.1 PETD, Solyc01g017430 Cytochrome b6-f complex subunit 4 OS=Nymphaea alba... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003954 NADH dehydrogenase activity IEP HCCA
MF GO:0003955 NAD(P)H dehydrogenase (quinone) activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009579 thylakoid IEP HCCA
BP GO:0009767 photosynthetic electron transport chain IEP HCCA
BP GO:0009772 photosynthetic electron transport in photosystem II IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0015453 oxidoreduction-driven active transmembrane transporter activity IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016168 chlorophyll binding IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
BP GO:0017004 cytochrome complex assembly IEP HCCA
BP GO:0019684 photosynthesis, light reaction IEP HCCA
MF GO:0020037 heme binding IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
MF GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA

No InterPro domains available for this sequence

No external refs found!