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  5. Ceric.05G041600.1

Ceric.05G041600.1 (PSBH, Ceric.05G041600)


Aliases : PSBH, Ceric.05G041600

Description : component *(PsbH) of PS-II complex & original description: pacid=50577637 polypeptide=Ceric.05G041600.1.p locus=Ceric.05G041600 ID=Ceric.05G041600.1.v2.1 annot-version=v2.1


Gene families : OG0011086 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0011086_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.05G041600.1
Cluster HCCA: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
ATCG00710 PSBH photosystem II reaction center protein H 0.29 OrthoFinder output from all 47 species
Azfi_s0725.g083817 No alias component *(PsbH) of PS-II complex & original... 0.09 OrthoFinder output from all 47 species
Ceric.05G051400.1 PSBH, Ceric.05G051400 component *(PsbH) of PS-II complex & original... 0.12 OrthoFinder output from all 47 species
Ceric.16G061100.1 PSBH, Ceric.16G061100 component *(PsbH) of PS-II complex & original... 0.09 OrthoFinder output from all 47 species
LOC_Os04g16848.1 LOC_Os04g16848 component PsbH of PS-II complex 0.08 OrthoFinder output from all 47 species
LOC_Os06g39704.1 LOC_Os06g39704 component PsbH of PS-II complex 0.08 OrthoFinder output from all 47 species
LOC_Os08g15296.1 LOC_Os08g15296 component PsbH of PS-II complex 0.27 OrthoFinder output from all 47 species
LOC_Os10g21322.1 LOC_Os10g21322 component PsbH of PS-II complex 0.03 OrthoFinder output from all 47 species
Smo187629 PSBH Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.03 OrthoFinder output from all 47 species
Solyc00g500026.1.1 PSBH, Solyc00g500026 component PsbH of PS-II complex 0.29 OrthoFinder output from all 47 species
Solyc00g500072.1.1 PSBH, Solyc00g500072 component PsbH of PS-II complex 0.29 OrthoFinder output from all 47 species
Solyc11g006675.1.1 PSBH, Solyc11g006675 component PsbH of PS-II complex 0.21 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003954 NADH dehydrogenase activity IEP HCCA
MF GO:0003955 NAD(P)H dehydrogenase (quinone) activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009579 thylakoid IEP HCCA
BP GO:0009767 photosynthetic electron transport chain IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0015453 oxidoreduction-driven active transmembrane transporter activity IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016168 chlorophyll binding IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
BP GO:0019684 photosynthesis, light reaction IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP HCCA
CC GO:0034357 photosynthetic membrane IEP HCCA
CC GO:0042651 thylakoid membrane IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!