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  5. Ceric.05G037200.1

Ceric.05G037200.1 (ATWBC11, ABCG11, DSO,...)


Aliases : ATWBC11, ABCG11, DSO, COF1, WBC11, Ceric.05G037200

Description : subfamily ABCG transporter & original description: pacid=50578821 polypeptide=Ceric.05G037200.1.p locus=Ceric.05G037200 ID=Ceric.05G037200.1.v2.1 annot-version=v2.1


Gene families : OG0000139 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000139_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.05G037200.1
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
Ala_g35102 ATWBC11, ABCG11,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g27271 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Len_g22633 ATWBC11, ABCG11,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g29286 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0009.g004346 ATWBC11, ABCG11,... not classified & original description: CDS=5-1900 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0127.g021852 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: CDS=1-1884 0.03 OrthoFinder output from all 47 species
Sam_g24075 No alias subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g26365 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0140359 ABC-type transporter activity IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005759 mitochondrial matrix IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
CC GO:0031974 membrane-enclosed lumen IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
CC GO:0043233 organelle lumen IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0051087 chaperone binding IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
CC GO:0070013 intracellular organelle lumen IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 32 183
IPR013525 ABC_2_trans 333 542
IPR043926 ABCG_dom 212 270
No external refs found!