- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : Ceric.05G020600
Description : ssDNA-binding protein *(OSB) & original description: pacid=50577226 polypeptide=Ceric.05G020600.1.p locus=Ceric.05G020600 ID=Ceric.05G020600.1.v2.1 annot-version=v2.1
Gene families : OG0000043 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Adi_g014847 | OTP84 | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g024716 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g058520 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g11380 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g25255 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Ala_g38619 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g06418 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Als_g07070 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g07076 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g07419 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g07473 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g18223 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g18515 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Als_g19218 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g19286 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g26434 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g30420 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g30870 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g54567 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g54731 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g55301 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Als_g55312 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g55317 | CRR22 | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Als_g55328 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g09010 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aop_g25160 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g29116 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Aop_g31319 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aop_g31791 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Azfi_s0131.g049164 | No alias | not classified & original description: CDS=1-2763 | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0250.g060258 | No alias | not classified & original description: CDS=1-1893 | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0345.g065805 | No alias | not classified & original description: CDS=1-2679 | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0469.g072874 | CRR22 | not classified & original description: CDS=1-1206 | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s1399.g102577 | No alias | not classified & original description: CDS=1-951 | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g05221 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g05975 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g07596 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g07638 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g19873 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g19906 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g20804 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Cba_g20867 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g29515 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g67030 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g67479 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g67911 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g74875 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g75111 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g75125 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g75387 | OTP84 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g75405 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.37G043200.1 | Ceric.37G043200 | not classified & original description: pacid=50616612... | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g10610 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g22240 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g29239 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g01720 | OTP84 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dde_g02346 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g26328 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g47619 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g48080 | OTP86 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g09251 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Len_g12066 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g22449 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Len_g30749 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Len_g33280 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g58364 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g06175 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g06274 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g09544 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g12538 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g13214 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g06113 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g26707 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g45899 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g08800 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g14001 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g16901 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g17001 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g18405 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g25433 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g12572 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g12601 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g43649 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g59802 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g02336 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g03867 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g05188 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g05885 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g06936 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g17719 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Ppi_g33159 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g55632 | No alias | cofactor of plastid-encoded RNA polymerase *(TAC9) &... | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0051.g013947 | No alias | not classified & original description: CDS=131-3355 | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g07955 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g16270 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g17490 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g24544 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g30193 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g04234 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g05090 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g06738 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g08260 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g14865 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g16921 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Spa_g18788 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g57330 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g09995 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g45095 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g45774 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0008270 | zinc ion binding | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043169 | cation binding | IEP | HCCA |
| MF | GO:0046872 | metal ion binding | IEP | HCCA |
| MF | GO:0046914 | transition metal ion binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 228 | 275 |
| IPR002885 | Pentatricopeptide_repeat | 331 | 374 |
| IPR002885 | Pentatricopeptide_repeat | 773 | 829 |
| IPR002885 | Pentatricopeptide_repeat | 449 | 475 |
| IPR002885 | Pentatricopeptide_repeat | 566 | 592 |
| IPR002885 | Pentatricopeptide_repeat | 140 | 157 |
| IPR002885 | Pentatricopeptide_repeat | 303 | 324 |
| No external refs found! |